KEGG   Clostridium ljungdahlii: CLJU_c32880
Entry
CLJU_c32880       CDS       T01276                                 
Name
(GenBank) predicted two-component response regulator
  KO
K06714  arginine utilization regulatory protein
Organism
clj  Clostridium ljungdahlii
Brite
KEGG Orthology (KO) [BR:clj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:clj03000]
    CLJU_c32880
Transcription factors [BR:clj03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    CLJU_c32880
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 AAA_5 AAA PAS_9 ATPase AAA_2 AAA_3 AAA_PrkA Mg_chelatase bpMoxR HTH_50 PAS_4 HTH_30 AAA_7 AAA_16
Other DBs
NCBI-ProteinID: ADK16334
UniProt: D8GRG6
Position
complement(3594237..3595880)
AA seq 547 aa
MISIDIMLFIDNDNVLRHVKFGDLTRTDKRIYILKKYIGNEITSFLDVDLKIDSGYIKWG
ELFLRYFKTENFTGKGYILYITQAESDEDLYRAAFDCLSEGMQIYDKNAHLVFCNKFNEK
IEKMDRRNIIGKHLLDIYSLEEDYSTILNTMKKGEAIVDRCDNFKNNKGEIISTMNSGYP
LFLGSNLIGAVGLVQDVSVFQKYREKAAIFKNFIDTKKSNKYLKSPKKYYALKYYNFDDI
IGKDENFLEAINLACNVAERDCSVLIYGETGTGKELFAQSIHSASKRKYKEFIAVNCAAI
PENLVEGILFGTEKGAFTGSYDKKGLFEQAEGGTLFLDEINSMSLQMQSKLLRVLQEKSF
RRVGGSKDIESNVRIISSTNEKPFSLIKNGKMRSDLYYRISTITINIPPLRERKKDIELL
AQLFMKKLCRNYSKNINVMSDEVIKVFKEYDWPGNVRELQHCIEYIFNTITEDTIYISDL
PQYMKKKANRDCKKGLQHKTLEQILNEYEREVIKTALRKNKNNVTNTAKYLGMKRQSLQY
RMKKYGL
NT seq 1644 nt   +upstreamnt  +downstreamnt
atgatttccattgatattatgttatttattgataatgataatgttctaagacatgtcaaa
tttggagatttaacgagaacagataagaggatatatattttaaaaaaatatataggaaat
gaaatcactagttttttagatgtagatttgaaaatagatagtggttatataaaatggggg
gagctatttcttagatattttaaaaccgagaattttacaggcaaaggatacattttatac
ataactcaggcagaaagtgatgaagatctatatagggcggcttttgactgcttatcagaa
ggaatgcagatatatgataagaatgcacatcttgtattttgcaataaatttaatgagaaa
attgaaaagatggatagaagaaatataattggaaagcatttattggatatttatagttta
gaggaagattatagtacgattttaaatacaatgaaaaagggagaagctatagtagataga
tgtgataattttaagaataataaaggtgaaataatttcaacaatgaattcaggttatcct
ttatttctaggaagtaatttaattggagctgttgggttagtacaagatgtgtcagttttc
caaaagtatagggagaaagctgcaatttttaagaattttatagatactaaaaaaagtaat
aaatatttaaagtcgccaaaaaagtactatgcattaaaatattataattttgatgatata
attggaaaagatgaaaattttcttgaagcaattaatttagcatgtaatgttgctgaaaga
gattgttctgtacttatatatggggagactggtactggcaaggaattgtttgcacagagt
attcattctgcaagtaaaagaaaatataaggaattcattgcagtaaactgtgctgctatt
cctgaaaatttagtagagggtatattgtttggtacagaaaagggagcctttactggaagt
tatgataagaagggactatttgaacaggctgagggcggtacattatttttagatgaaatt
aattcaatgagtcttcaaatgcagtctaaacttcttagggttttgcaggagaaaagtttt
agaagggtaggaggaagcaaagatattgaaagtaatgtaaggatcatttcatctaccaat
gaaaaaccattttcattgattaaaaatggcaagatgagaagtgatttatattatagaata
agtacaataacgattaacattcctccacttcgggaaagaaaaaaagatattgaactactg
gcacaattatttatgaaaaaattatgccgtaattattcaaaaaatataaatgtaatgtca
gatgaagttatcaaagtatttaaagaatatgattggccgggaaacgtaagggagctgcag
cattgtattgaatatatatttaacactataactgaggatactatatatataagtgattta
ccccaatatatgaaaaagaaagctaacagggactgcaaaaaaggtttgcagcataaaaca
ctggaacagatacttaatgaatatgagagagaagtaataaaaactgctcttagaaaaaat
aagaataatgtgacaaatacagcaaaatacttgggaatgaagagacaaagtctgcaatat
agaatgaaaaaatatggattatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (41)   

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