KEGG   Clostridium ljungdahlii: CLJU_c36230
Entry
CLJU_c36230       CDS       T01276                                 
Name
(GenBank) putative exonuclease with a BRCT domain
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
clj  Clostridium ljungdahlii
Pathway
clj03030  DNA replication
clj03430  Mismatch repair
clj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:clj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CLJU_c36230
   03430 Mismatch repair
    CLJU_c36230
   03440 Homologous recombination
    CLJU_c36230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:clj03032]
    CLJU_c36230
   03400 DNA repair and recombination proteins [BR:clj03400]
    CLJU_c36230
Enzymes [BR:clj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CLJU_c36230
DNA replication proteins [BR:clj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CLJU_c36230
DNA repair and recombination proteins [BR:clj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CLJU_c36230
SSDB
Motif
Pfam: RNase_T BRCT Rv2179c-like DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: ADK16664
UniProt: D8GT65
Position
3941308..3942618
AA seq 436 aa
MLFDFVAIDFETANNNFNSACSLGIAAVKNNKICKKDYFLIHPPTLDFNKKNISINGITP
KDIENSPLFPDIWNDIHTYFDDNIIIAHNAVFDMSVLKNCLLEYDISMPNFNYICSIPIS
TKLCGGKGIGKSLEDRAKYFGVDLGHHHNSLDDAAACANLVIECIKRAHKKNLESFCHTY
TSLPIKTFKDLNPQKGFIANTKNSFTNNKFNTVKISEIKPDNDNIIDTSNPFYNKNVVFT
GELKSLGRKEAMQKVVNLGGTLKSGVSKKTDYLIVGNQDKSLVGENGISSKEEKAAELNE
NGSSIKILNESEFLELIKTPNKENSFDDSNEVVDLNSTIIFNTLDDKINKLREWKLLSRT
AADLKDIYYKNKNETYKCDIIGYSTKKTNLNCLSQFYETIVIKVNDKIIRIAPAYLLDMQ
KKDFYLSYNSVQPIIG
NT seq 1311 nt   +upstreamnt  +downstreamnt
atgctatttgactttgtagcaatagattttgagacagcaaataataatttcaacagtgct
tgttcacttggaattgctgctgtaaaaaataataaaatatgtaaaaaagattacttttta
attcatccaccaactcttgattttaataaaaagaatatctccataaatggaataactcct
aaggacatagaaaattcacctctttttcctgatatatggaatgatatacatacttacttt
gatgataatataataattgctcacaatgccgtatttgatatgtcagtactaaaaaattgt
ttattagaatatgatatttctatgcctaatttcaactatatctgcagtatacctatatcc
acaaaattatgtggagggaaaggaattggtaaatctttagaagaccgtgccaaatatttt
ggagtagatttaggacatcatcataattctttagatgatgctgcagcatgtgcaaattta
gtaattgaatgcataaaacgtgctcataaaaagaaccttgaatctttttgtcatacatat
accagccttccaataaaaacttttaaagatctaaatcctcaaaaaggttttattgcgaat
actaaaaacagtttcactaataacaaattcaatacagttaaaatatctgaaattaaacct
gacaatgacaatattatcgatacgtccaatccattttataataaaaatgtggtcttcaca
ggtgaacttaaaagtttaggtagaaaagaagctatgcaaaaagtagtcaacttaggtggc
acattaaaaagtggtgtatctaaaaagacagattacttaatagttggaaaccaggataaa
tctcttgtaggtgaaaatggaataagttccaaggaagaaaaagcagctgaattaaatgaa
aacggatcttctataaaaattttgaatgaatccgaatttctagaattgatcaaaactccc
aataaagaaaatagttttgatgattccaatgaagttgttgacttaaattcaactattatt
tttaacactttagatgacaagataaacaagttaagggaatggaagcttttaagtcgtaca
gcagctgatttaaaagacatatattataaaaataaaaatgaaacttataaatgtgacatc
ataggatactcaactaagaaaacaaatttaaattgtttaagtcaattttatgaaaccata
gtaataaaagttaatgataaaattataagaatagctccagcatatttattagatatgcag
aaaaaggatttttatctttcttataacagtgtacaacctataataggttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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