KEGG   Campylobacter lari RM16712: UPTC16712_0232
Entry
UPTC16712_0232    CDS       T03556                                 
Symbol
ribD
Name
(GenBank) diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
clm  Campylobacter lari RM16712
Pathway
clm00740  Riboflavin metabolism
clm01100  Metabolic pathways
clm01110  Biosynthesis of secondary metabolites
clm01240  Biosynthesis of cofactors
clm02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:clm00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    UPTC16712_0232 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    UPTC16712_0232 (ribD)
Enzymes [BR:clm01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     UPTC16712_0232 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     UPTC16712_0232 (ribD)
SSDB
Motif
Pfam: dCMP_cyt_deam_1 RibD_C RVT_3
Other DBs
NCBI-ProteinID: AJD05777
Position
206970..207962
AA seq 330 aa
MNHEFYMNLAIDEAWKYQLLTYPNPAVGCVILDKNGKILSIEAHKEAGKAHAELEAVSKA
LKVLNPNLDLPQNANDLHEFICQNHQGLLKGASAYVSLEPCNHQGKTPPCAKLFSTLGFS
EVFIATKDEHKLASGGAEFLKDQGIKVHMGICEQRAKELLKPFLKWQKSSFKFFKLALSL
NGSAYGKIVSSKASRTYAHALRSKLDLLVVGGETIRHDRPILDARLVQAKAPNLCILSRQ
NLESFDPNIPLFSVAEREIFTSIPSEARLIMYEGGENFLKAFKDELDMLLIFSSSNLNTF
ENVKLDLKLKPLYKGFLENDTYGFYEIIKS
NT seq 993 nt   +upstreamnt  +downstreamnt
atgaatcacgaattttatatgaatttagccatagatgaagcttggaaatatcagctttta
acctaccctaatccagccgtaggctgtgtgatcttagataaaaatggcaaaattttaagc
atagaagcacacaaagaagcaggtaaggctcatgcagagcttgaagcagtgagtaaagcc
ttaaaagtgcttaatccaaatttagatttaccacaaaatgcaaatgatttgcatgagttt
atttgtcaaaatcatcaggggttattaaaaggcgctagtgcttatgtgagtttagaacct
tgcaatcaccagggtaaaactccaccttgtgcaaagctttttagtacgcttggttttagc
gaagtttttatcgccactaaagatgagcataagctcgcaagcggtggagcagagttttta
aaagatcaaggcataaaagttcacatgggaatttgcgaacaaagagctaaagagctttta
aagccttttttaaaatggcaaaagtcaagctttaaattttttaaactggccctttcttta
aatggctctgcttatggtaaaatcgtaagttctaaagcaagtagaacctatgctcatgca
ttgcgctcaaagcttgatttgcttgtagtgggcggagaaactataaggcatgataggcct
attttagatgcaaggttagttcaggctaaagcaccaaatttatgcatactaagccgtcaa
aatttagaaagttttgatccaaacattcctttatttagtgtagctgaaagagaaattttt
acaagcattcctagtgaagctaggcttatcatgtatgagggtggggagaattttttaaaa
gcctttaaagatgagttagatatgcttttgattttttcaagctcaaatttaaataccttt
gaaaatgttaagttagatttaaagctaaagcctttatacaaaggctttttagaaaatgat
acttatggattttatgagattattaaatcttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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