KEGG   Campylobacter lari RM16712: UPTC16712_0355
Entry
UPTC16712_0355    CDS       T03556                                 
Symbol
fdhF
Name
(GenBank) formate dehydrogenase N, alpha subunit, selenocysteine-containing
  KO
K00123  formate dehydrogenase major subunit [EC:1.17.1.9]
Organism
clm  Campylobacter lari RM16712
Pathway
clm00630  Glyoxylate and dicarboxylate metabolism
clm00680  Methane metabolism
clm01100  Metabolic pathways
clm01120  Microbial metabolism in diverse environments
clm01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:clm00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    UPTC16712_0355 (fdhF)
  09102 Energy metabolism
   00680 Methane metabolism
    UPTC16712_0355 (fdhF)
Enzymes [BR:clm01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.1  With NAD+ or NADP+ as acceptor
    1.17.1.9  formate dehydrogenase
     UPTC16712_0355 (fdhF)
SSDB
Motif
Pfam: Molybdopterin Molydop_binding Molybdop_Fe4S4
Other DBs
NCBI-ProteinID: AJD05899
Position
329818..332640
AA seq 940 aa
MALARRNFLKLAGIAGLGSAAFGSENKAIRTASEQEVANPYPDSKIVRTICSICSAGCGI
KAEVQDGVWVRQENAIEHPISQGSHCCKGIDQIDLTKSKQRIKYPMKKENGKWVRLTWEQ
AINEIGDKMLEIRKENGPDSVMFLGSAKFNNQQAYYFRKFAAFWGTNNIDHVARIUHSAT
VAGVANTWGYGAMTNHFGDVTKHSKMMIIFGANTAVANPIGFKHLLQAKDRNNAKLVVVD
PVFTKTAVHADEYVRIRPGTDIALVYGMLHLIFKNGWEDKELIKTRTYGVEEIKAEAAKW
TPEVVEDVTGVPAAQLEKITRMLATIKPATLFWALGITQHSVGSSNTRILAILQLVLGNI
GKPGAGTNIIRGHDNVQGATDMGCLADTLPAYYGLDDNAWNHFSNVWNVEREYLNSRFYS
KEWMHEKGFSLAKWWQGVLHEEKTYSNSPIRVLWVQGTGITSMAHTVKIQEALKKLDMIV
IAEPFVNEVAVLADRPDGIYIIPASTQFETEGYVTATNRAMQWRSQVVKPIYESKEDQEI
MFAFAKKFGFYKEYTRGMKMELKDHKLVQTRDDNDDNFIWPDDATREMSNGLLSIGLRGI
SAERLRKHQQNWEHFDPDTQRGIGGEVKGEYYGLPWPCWDKQHPGTSIMWNTDIPYEEGG
MGFRNRFGLEHDGHSQLADETFTPKGCKVKGGYPQITKENIEKVFNIKLSDKEKELMGAS
WSTDISGIILEKCREKSACCLGNARARMKVWEFADPIPLHREPIHSPRWDLVKKYPTWDD
QEKNFRVESKFISEQQKTDWSKEFPTIISSMRLVNLSGAGMLERTSKYLAAITPEMFANV
HPELALKYGINDGDMMWIHSPQGTKIKVKCVHNHSVTPDRICLPYNFAGIMQGVDLSYNY
PEGTKPYTIGESSNTVTNYGFDINTQISEFNAGLCRLEKA
NT seq 2823 nt   +upstreamnt  +downstreamnt
atggcattagcaagaagaaattttcttaagcttgctggtattgctggtcttggaagtgcg
gcttttggtagtgaaaataaagccattagaactgcaagtgaacaagaagtagcaaatcct
tatccagattctaagattgttagaacaatctgtagtatctgtagtgcaggctgtggaatt
aaagcagaagtgcaagatggagtttgggtgcgtcaagaaaacgctatagaacatcctatt
tctcaaggatcacactgctgtaaagggatagatcaaatcgatcttactaaatcaaaacag
cgtattaaatatcctatgaaaaaagaaaatggcaaatgggtgcgtttaacttgggagcaa
gctatcaatgaaattggtgataaaatgcttgaaatccgtaaagaaaatggacctgatagc
gttatgttcttaggttcggctaaatttaataaccaacaagcttattattttagaaaattt
gcagcattttggggtactaataatatagaccacgttgctagaatttgacatagtgcaaca
gtcgccggtgtggcgaatacatggggttatggcgctatgacaaatcattttggtgatgtg
actaaacactcaaaaatgatgattatttttggtgcaaatactgctgtggcaaatcctatc
ggatttaaacacttattgcaagcaaaagatcgtaataatgctaaattagtagttgtagat
cctgtatttacaaaaactgcagtgcatgctgatgaatacgtaagaattcgcccaggtaca
gatatagctttagtttatggtatgcttcatttaatcttcaaaaacggttgggaagataaa
gaattaatcaaaactagaacttatggggttgaagaaataaaagcagaggctgctaaatgg
actcctgaagttgtagaagatgtaacaggtgttccggctgctcaacttgaaaaaatcaca
agaatgttagctacaattaaacctgctacgctattttgggctttaggtatcactcaacac
tcagtaggtagctctaatacaagaatcctagctatcttgcaactcgttcttggtaatata
ggcaaaccaggcgcaggaacaaacatcatcagaggtcatgataatgttcaaggtgctact
gatatgggttgtttggctgatactttaccagcttattatggacttgatgataatgcttgg
aatcatttttctaatgtatggaatgttgagagagagtatttaaattcaagattttattct
aaagaatggatgcatgaaaaaggcttttcactagcaaaatggtggcaaggtgttttacat
gaagaaaaaacttattcaaactcacctatccgtgtactttgggtgcaaggaacgggtatt
acttctatggcacatacggtaaaaattcaagaagcacttaaaaaacttgatatgatcgta
attgctgagccttttgtaaatgaagtagcagttttagcagatcgtccagatggtatttat
attattcctgcttcaacccaatttgaaacagaaggttatgtaacagcgactaaccgtgct
atgcaatggcgttctcaagtagtaaaaccaatttatgaaagtaaagaagaccaagagatt
atgtttgcttttgctaaaaaatttggtttttataaagaatacactcgtggtatgaaaatg
gaattaaaagatcataaacttgtacaaacaagagatgataatgatgataatttcatatgg
cctgatgatgccacaagagaaatgagtaatggtcttttaagtataggcttaagaggtatt
tcagctgagcgtctaagaaaacaccagcaaaattgggaacattttgatcctgatactcaa
agaggtattggtggtgaagttaaaggtgaatattatggcttaccttggccttgttgggat
aaacaacacccaggcacttctatcatgtggaacacagatattccttatgaagaaggtggt
atgggctttagaaatcgctttggtttagagcatgatgggcattctcaattagcagatgaa
acttttactccaaaaggatgtaaagttaaaggtggctacccacaaattactaaagaaaat
atcgaaaaagtgtttaatatcaaactaagcgataaagaaaaagaattaatgggtgctagc
tggagcacagatatttcaggtattatcttagaaaaatgtagagaaaaaagtgcttgttgt
ttaggtaatgcaagagctagaatgaaagtttgggaatttgctgatcctatcccactacat
agagagcctattcactcgcctcgttgggatttggttaaaaaatatcctacttgggatgat
caagagaaaaactttagggttgagagtaaatttattagcgagcaacaaaaaacagattgg
agtaaagagtttccaactattatttcaagtatgcgcttagtaaatttaagcggtgcgggt
atgcttgagagaactagtaaatatcttgctgcaatcacacctgaaatgtttgctaatgtg
caccctgaacttgctttaaaatatggtataaatgatggtgatatgatgtggattcattca
ccacaaggcactaagattaaagtaaaatgtgtgcataatcattcagttacaccagataga
atttgtttgccttataattttgcaggtattatgcaaggtgtggatttaagttataattat
cctgaaggtactaaaccttatactataggggaaagttctaacacggttactaactatggt
tttgatataaatacgcaaatttctgagtttaatgcaggactttgcagacttgaaaaggct
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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