KEGG   Clostridium bornimense: CM240_1020
Entry
CM240_1020        CDS       T03165                                 
Name
(GenBank) hypothetical protein
  KO
K01732  pectin lyase [EC:4.2.2.10]
Organism
clt  Clostridium bornimense
Brite
KEGG Orthology (KO) [BR:clt00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    CM240_1020
Enzymes [BR:clt01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.10  pectin lyase
     CM240_1020
SSDB
Motif
Pfam: Pectate_lyase_4 RicinB_lectin_2 Ricin_B_lectin Abhydro_lipase
Other DBs
NCBI-ProteinID: CDM68184
UniProt: W6RX22
Position
rep1:1139729..1141738
AA seq 669 aa
MKNKRNIISIIIISMIIALLPLKNSEVLAATDYPIQEMEITTLDGYKLTISGDQDGSLLQ
VASSTGEQKERWKFTYVNGGYFKLVNQDSGRLVSTVSWGVSANSKCITFGDANKQEQCWI
IEGVDKDSLGNYITYKIKNYKDSNMVLTNNGKGEQVTLTKYTGANNQKWRLDSAGLEGFA
GYSKDMDGNDKAGTIGGVLGETVTVSTLDEFQKYSEGDDVRTIVITKDISKSSLTKVKVG
KNKTIIGAYGVSLTNLYFYLDQTCNSGNLIMKNLHIKHSEEINENNDIPLYISVGTNFWI
DHCTLEGHDLTENTSLHANDVDKLMYVGVKADYVTVSNSKFTGHKYGLILGYPADDESAQ
ATYTGYPRMTISNNFFQDVQTRAPGLMRYGYFHSYNNYIESATLGYTACTNANIYSEKNY
FNNCNSSGLVNDYGTAYFTDEGSYPTVTASKSKATSWRPKNNYTYTTMKTSELREYAENY
AGAQSSKSKMNYSTYKSAGVQSSNYVVTSTASNNTENTASGLIDGGIYYIKNVNSNKYLD
VYNGIDENNTNVQQHPGNGEKAQKFKVVYVGDGYYKLVSQVGTGKKVLDVSKKSSKNGAN
IAIYKDNSGDNQKFQLISLGNSRYTIATKVSKGKSVVEVKDASTAKKANVQQWEYNGHKC
QQWKFELAE
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgaaaaataaaagaaatattataagtattataattatatcaatgataatagcattatta
ccattgaaaaatagtgaagttttagcagctacagattatcctatacaagaaatggagata
actactttagatggttataaattaaccatttcaggggatcaggatggttctttattgcaa
gtagcaagtagtactggggaacaaaaggaaaggtggaaattcacatatgttaatggtgga
tattttaaactggtaaatcaggattctggaagactagtttctactgtatcatggggagtt
tcagctaatagtaaatgtataacttttggtgatgctaataagcaagaacagtgttggata
atagaaggggtagataaagattctttaggaaattatataacttataaaataaaaaattat
aaagattcaaatatggttttaactaataatggaaaaggagaacaggttacattaacaaaa
tatacaggtgctaataatcaaaagtggagattagatagtgcgggactagaaggttttgca
ggatatagtaaagatatggacggaaatgataaagcaggaactattggtggagtattggga
gaaactgttacagtatctactttagatgaatttcaaaagtattccgaaggtgatgatgtg
agaacaattgtaatcactaaagatatatctaaaagctcattaacaaaagttaaagtaggt
aaaaataagacaataattggtgcttacggagtttctttaactaatttatatttttatcta
gatcagacttgcaattctggtaatttaataatgaaaaacttacatataaagcattcagaa
gaaataaatgaaaataatgatattccactttatataagtgtaggaacaaatttttggata
gatcattgtactttagaaggacatgaccttactgaaaatacgtcattacatgctaatgat
gttgataaacttatgtatgtaggtgttaaagcagattatgttacagtttctaattctaag
tttacaggtcataaatatggtttaatcttaggttatccagcagatgatgaatctgcacaa
gcaacttatacaggatatcctagaatgacaatatcaaataacttttttcaagatgttcaa
actagagctccaggacttatgagatatggatattttcatagttataataactatatagaa
tcagcaacattaggttatacagcttgtacaaatgccaatatatattctgagaaaaattac
tttaataattgtaacagtagtggattagttaatgactatggaacagcatattttactgat
gaaggaagttatccaacagtaacagcatctaaatctaaggcaacatcatggagacctaaa
aataactatacatatacaactatgaaaactagtgagcttagagaatatgctgaaaattat
gctggtgcacaaagttctaaaagtaaaatgaactatagtacatataaatcagcaggagtt
caatcatcaaattatgtagttacttctacagcatcaaataatactgaaaatacagcaagt
gggttaattgacggtggaatatattatataaaaaatgttaatagtaataaatatttagat
gtatataatggaattgatgaaaataatactaatgtgcaacaacatccaggtaatggagaa
aaagctcaaaagtttaaagtagtatatgtaggtgatggatactataaattagtatcacaa
gtaggaactggaaagaaagttcttgatgtaagtaagaaaagtagcaaaaatggtgcaaat
atagctatttataaagataattctggagataatcaaaaatttcaacttattagtttagga
aatagtagatatactatagctacaaaggtatcaaaaggaaaatctgtagttgaagtaaaa
gatgcaagtactgcaaaaaaggcaaatgtacaacaatgggaatataatggtcataaatgt
caacaatggaagtttgaattagctgaatag

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (49)   
   KEGG ORTHOLOGY (1)   
   RefGene (46)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (58)   

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