KEGG   Clostridium bornimense: CM240_1095
Entry
CM240_1095        CDS       T03165                                 
Symbol
rffA
Name
(GenBank) Lipopolysaccharide biosynthesis protein RffA
  KO
K02805  dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
Organism
clt  Clostridium bornimense
Pathway
clt00541  O-Antigen nucleotide sugar biosynthesis
clt01100  Metabolic pathways
clt01250  Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:clt00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    CM240_1095 (rffA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:clt01007]
    CM240_1095 (rffA)
Enzymes [BR:clt01000]
 2. Transferases
  2.6  Transferring nitrogenous groups
   2.6.1  Transaminases
    2.6.1.59  dTDP-4-amino-4,6-dideoxygalactose transaminase
     CM240_1095 (rffA)
Amino acid related enzymes [BR:clt01007]
 Aminotransferase (transaminase)
  Others
   CM240_1095 (rffA)
SSDB
Motif
Pfam: DegT_DnrJ_EryC1 Aminotran_1_2 Aminotran_5 OKR_DC_1 Cys_Met_Meta_PP Beta_elim_lyase PfEMP1_CIDRalpha1_dom
Other DBs
NCBI-ProteinID: CDM68259
UniProt: W6RXA3
Position
rep1:1225240..1226385
AA seq 381 aa
MINFNEPIVTGKEIDNIKSAINLKKISGDGVFTKKCSSWFEKKFNVKKVLFTTSCTHALE
MSALLCDIKPGDEVIAPSYTFVSTVNAFVLRGAKIVFVDIRPDTMNIDEDIIEKAITEKT
KVILPVHYAGVSCDMDKIMKIAKKYNLYVVEDAAQGMMSKYNNMYLGTIGNLGCYSFHET
KNYSMGEGGLLLINDERFIERAEIIREKGTDRSKFFRGEVDKYSWVDIGSSYLPSEINVA
YLYPQLEIVDKINFDRVNSWKCYYKNLKELEKQSLIELPFVPDECEINGHIFYIKVKDIQ
ERDRLINYLKINGVLTVFHYIPLHSSKIGKKYGRFYGEDNYTTKESERILRLPMYYGLKE
KEIIYITSKITEFFAKKNGEK
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgattaattttaatgaacctattgttacaggaaaagaaatagacaatattaaatctgct
ataaatttgaaaaaaatttcaggtgatggtgtctttacaaaaaagtgttctagttggttt
gaaaagaagtttaatgttaaaaaggtgctttttactacttcatgtacccatgcattagag
atgtcagcattattatgtgatataaagcctggagatgaagtaattgctccttcatatact
tttgtatcaactgttaatgcatttgttctaagaggtgcaaaaatagtatttgtagatatt
agacctgatactatgaatatagatgaagatattattgaaaaagcaataactgaaaaaaca
aaagttatattacctgttcactatgcaggtgttagttgtgatatggataagattatgaaa
atagcaaaaaagtataatttatatgtggtagaggatgctgcacaaggaatgatgagtaaa
tacaacaatatgtatttaggaactataggtaatcttggatgctatagttttcatgaaacc
aagaattattctatgggagagggagggctactattaataaacgatgaaagatttattgaa
agggctgaaataattagagaaaagggtactgatagaagtaaattttttagaggagaagta
gacaagtattcatgggtagatataggttcctcatatttacctagtgaaataaatgtagca
tatttgtatccacagttagaaattgttgataaaataaattttgatagagttaatagttgg
aaatgttattataagaatctaaaggaattagaaaaacaatctttaatagaattacctttt
gttcctgatgaatgtgagattaatggtcatatattttatataaaggttaaggatatacag
gaaagagatcggttaatcaattatttaaaaattaatggagtgttgacagtatttcattat
ataccactacattcatcaaagattggaaaaaagtacggaaggttttatggagaggataat
tatactacaaaagaaagcgaaagaatattacggttaccaatgtattatggattaaaagaa
aaagaaattatttatattacaagtaaaattacagaattttttgctaaaaaaaatggagaa
aaatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (24)   

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