KEGG   Clavispora lusitaniae CBS 6936: A9F13_01g05335
Entry
A9F13_01g05335    CDS       T05147                                 
Name
(GenBank) putative DNA-directed RNA polymerase II subunit
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
clus  Clavispora lusitaniae CBS 6936
Pathway
clus03020  RNA polymerase
clus03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:clus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    A9F13_01g05335
  09124 Replication and repair
   03420 Nucleotide excision repair
    A9F13_01g05335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:clus03021]
    A9F13_01g05335
   03019 Messenger RNA biogenesis [BR:clus03019]
    A9F13_01g05335
   03400 DNA repair and recombination proteins [BR:clus03400]
    A9F13_01g05335
Transcription machinery [BR:clus03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     A9F13_01g05335
Messenger RNA biogenesis [BR:clus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     A9F13_01g05335
DNA repair and recombination proteins [BR:clus03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      A9F13_01g05335
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-ProteinID: OVF11078
UniProt: A0AA91Q4F9
AA seq 152 aa
MDQYLRDKLLSDVEGTCTGQFGYIVCVLDCMNIDVGRGRIIPGSGMAEFEVKYRAVVWKP
FKGEVVDAVVTTVNKMGFFADVGPLSVFVSTHLISSDMKFNPSANPPAYVSPDETIEKGS
RVRLKIVGTRTDVNEIYAIGSIKEDYLGPSPM
NT seq 459 nt   +upstreamnt  +downstreamnt
atggatcagtacttgcgagacaagttactcagtgatgttgaaggtacatgtactggtcag
tttggttacattgtgtgtgttttggactgtatgaatattgacgttggccgtggcagaatt
atacctggaagtggaatggctgagtttgaagtcaagtatagagcggtggtatggaagcct
ttcaagggagaggttgtcgatgctgttgttaccactgtgaataagatgggctttttcgca
gacgttggacctttgtcggtttttgtcagtactcacttgatatcgtccgacatgaaattt
aacccatcagccaatcctccagcatacgttagtcccgatgagacgatcgagaaaggatct
cgtgtaagattgaagattgtgggtactagaacagacgtgaatgagatttatgctattgga
agtataaaagaagattacttgggcccaagtccaatgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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