KEGG   Clavispora lusitaniae CBS 6936: A9F13_09g02365
Entry
A9F13_09g02365    CDS       T05147                                 
Name
(GenBank) putative replication factor C subunit
  KO
K10756  replication factor C subunit 3/5
Organism
clus  Clavispora lusitaniae CBS 6936
Pathway
clus03030  DNA replication
clus03410  Base excision repair
clus03420  Nucleotide excision repair
clus03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:clus00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A9F13_09g02365
   03410 Base excision repair
    A9F13_09g02365
   03420 Nucleotide excision repair
    A9F13_09g02365
   03430 Mismatch repair
    A9F13_09g02365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:clus03032]
    A9F13_09g02365
   03036 Chromosome and associated proteins [BR:clus03036]
    A9F13_09g02365
   03400 DNA repair and recombination proteins [BR:clus03400]
    A9F13_09g02365
DNA replication proteins [BR:clus03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    A9F13_09g02365
  DNA Replication Termination Factors
   ELG1-RFC complex
    A9F13_09g02365
Chromosome and associated proteins [BR:clus03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    A9F13_09g02365
DNA repair and recombination proteins [BR:clus03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     A9F13_09g02365
  Check point factors
   HRAD17(Rad24)-RFC complex
    A9F13_09g02365
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 DNA_pol3_delta AAA_assoc_2 AAA_11 AAA_16 RuvB_N AAA_14 AAA_22 DUF815 AAA_24 ResIII AAA_7 AAA_30 AAA_5 AAA_18 DEAD Viral_helicase1 AAA_19 AAA_28 bpMoxR RNA_helicase Mg_chelatase AAA_3 nSTAND3 L27_1 SRP54 ABC_tran ATPase_2
Other DBs
NCBI-ProteinID: OVF08293
UniProt: A0AA91Q0E8
AA seq 327 aa
MSNKENLPWVEKYRPSSLDEVYGQEDIVATVRKFVHEGKLPHLLFYGPPGTGKTSTITAL
AKEIYGPNYKSMVLELNASDDRGIDVVRNRIKDFASTMQIFSRGFKLIILDEADAMTAVA
QNSLRRIIERYTKNTRFCILANYSHKLNPALLSRCTRFRFNPISEEAIRDRVQNVISQEK
LNITPEAESALLSLSKGDMRRALNVLQACKAALENPEDQVDIDMIYECIGAPHPQDIEAV
LDSVLKDDWTTCILTFDRYKKSKGLALVDLVSGFVEILSKYDLKPATRVKILKGLSDIEY
GISKGGNDKIQTSAVVAVIKSAMESQA
NT seq 984 nt   +upstreamnt  +downstreamnt
atgtccaacaaagagaacttgccttgggtcgagaaatatcgtccttcttcgctagatgag
gtctacggccaagaagacatcgtggctactgtcagaaagtttgtacatgaagggaagttg
ccccatcttcttttctatggaccaccggggacaggaaaaacatctacaatcacagcgtta
gccaaggaaatatatgggcccaattacaaaagcatggtgttggaactaaatgcctctgat
gacagaggtatagacgttgttcgtaacagaatcaaggattttgcaagcacaatgcagatc
ttcagccgtggtttcaagcttattatattggatgaagcagatgccatgacagcagtggcc
caaaactccttgcgccgaatcatcgagagatacacaaagaacaccagattttgtatcttg
gctaattactcacataaattgaacccagcgttactttcgagatgcacgcgattccggttc
aaccccatttctgaagaggccattcgagatcgcgtgcagaatgtgatcctgcaagagaag
ttgaatattacaccagaagccgagctggctcttctttcgttatccaaaggagatatgaga
agggcgctcaacgtgttacaagcttgcaaagctgcgttagaaaatccagaagatcaagtt
gacatcgacatgatctacgagtgtattggtgcgccacatcctcaagacatcgaagctgtt
ttggatctggtcttgaaagatgactggacgacatgcatcttgacatttgaccgctacaag
aaatcgaagggattggctttagtggaccttgttctggggttcgtggagatcttgtctaaa
tacgacttgaaacctgctaccagagtcaagatattgaaaggcttgtcagacatcgagtac
ggtatctcaaaaggtggaaacgacaagatccaaactagcgctgtagtggctgtcatcaag
tctgcgatggaaagccaggcctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (31)   
   Pfam (31)   
All databases (44)   

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