KEGG   Columba livia (rock pigeon): 102095596
Entry
102095596         CDS       T02912                                 
Symbol
DHX40
Name
(RefSeq) probable ATP-dependent RNA helicase DHX40 isoform X1
  KO
K18711  ATP-dependent RNA helicase DHX40 [EC:3.6.4.13]
Organism
clv  Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:clv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clv03019]
    102095596 (DHX40)
Messenger RNA biogenesis [BR:clv03019]
 Eukaryotic type
  mRNA processing factors
   Other processing factors
    102095596 (DHX40)
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C HA2_C HA2_N DUF4685 DEAD
Other DBs
NCBI-GeneID: 102095596
NCBI-ProteinID: XP_021156138
Position
Unknown
AA seq 659 aa
MGCSLGGVVGYQVRFDDCTSEDTAIKYMTDGCLLRQILADPLLSKYSIIILDEAHERSLS
TDILFGLLKKLFLQKEPAGRKTAMKVVVMSATLEVEKLSEFFGHCSVLHIPGRSYPVKEI
FCNLLSPRDTGSSAYVTEAVKVTLDIHLNEPEGDILVFLTGQFEIEKACDLLFKKAESID
YRYEVHDRSVEGLLILPLYGSMSTDQQKRIFLPAPTGVRKCVVSTNIAATSLTIEGVRYV
VDSGFVKQLNHNPRVGLDVLEVVPISKSEAKQRAGRAGRTSSGKSYRLYSEEFWEQCMPD
HTVPEIKRTSLTSVILTLKCLSVHDVIRFPYLDCPEERHILEALKQLYQCDAIDRRGHVT
RLGEFLVQFPLPPNLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPGDPQKQKEAELQH
QELASQVGGCNDFATLLNIFEQCKASKSPSAWCHEYWIHWRALKSAFSVEKQLREIISKL
KQLPDFPKETFEGSRTEILRRCLCAGYFINVARRSAARTFCTMDGHGSIVYIHPSSTLYN
QETRLEWIIFHDVTVTSKIYVRTVCPVRYEWVKDLLPRLHQIDAYELSSVAREEVTEEEI
TKWKHKEELKRQHEGTTDNSAKKMERRNNDKSILDARARYLERKQQRAQGLSGAVKEMG
NT seq 1980 nt   +upstreamnt  +downstreamnt
atgggctgctcgctgggcggtgtggtcgggtaccaggtccgcttcgacgactgcaccagc
gaggatactgccatcaagtatatgaccgatggctgcttattgaggcaaatcttagcagat
ccccttctcagcaagtacagtatcatcattttggatgaagctcatgagcggagcctcagc
actgatattttatttggtttgctgaagaaactgtttctacagaaggaaccagcaggcaga
aagacggccatgaaggtggtggtgatgtcagccaccctggaggtggagaagctctcggag
ttctttggacactgctcagtgctgcatattccaggaagaagttatcccgtcaaggagata
ttctgcaacctgctcagcccgcgggacacgggcagctctgcctatgtcacagaggctgta
aaagtgacactggatatccacttaaatgaaccagaaggcgacatcttggttttcctgaca
ggtcaatttgagatagagaaagcttgtgacttacttttcaagaaagcagaatccatcgat
taccggtatgaagtacacgaccggtctgttgaaggcctccttatcttaccgttgtatggg
tcaatgtcaacagatcaacagaaaagaatatttttgccagctcccacgggcgtcaggaaa
tgtgtggtgtccacaaacattgctgcaacatctctgacgattgagggagtcaggtacgta
gtggatagtggatttgtgaagcagttgaatcacaacccccgagttggcttggacgtactg
gaggtggttcccatttcaaagagcgaagcaaagcaacgagctggccgagctggccggaca
tcatccggaaaaagctaccggctctacagcgaggagttctgggagcaatgcatgcccgat
cacacagtgcccgagatcaagagaaccagcctgacatccgtcatcctgaccttgaagtgc
ctttccgtgcacgatgtcatcagatttccctacttggactgccctgaagaaaggcacatt
ttagaagctctcaagcaactctaccagtgtgatgctattgacaggagaggccacgtgaca
aggctgggtgaattcctggtgcagtttcccctccctcccaacctgacctgtgctgtcatc
aaagctgcttctctcgactgcgaagatctgctgcttcccatcgcagccatgttgtctgtg
gaaaacgtcttcattcgtccaggtgatcctcagaagcaaaaggaggcagaacttcaacac
caggaacttgcctcacaagtaggaggatgcaacgactttgccaccctcttaaatattttt
gaacagtgcaaagcaagcaagtctccttcagcttggtgccacgaatactggatccattgg
agagctttaaaatctgcttttagtgtggaaaaacaacttcgggaaataatcagtaaactg
aaacagctgccagacttccctaaagagacatttgaaggctccagaactgagattctcaga
agatgtctatgtgcaggatacttcatcaacgtagctaggagatctgcagccaggacattc
tgcacgatggatggacacggcagcattgtctatatccatccctcatctacactgtataac
caggagactcgcctcgagtggatcatcttccacgatgtcacagtgacatccaaaatctat
gtccggacagtgtgtcccgttcgctatgaatgggtcaaagacttgttgcccagattgcat
caaattgatgcgtatgaactgagcagtgtggcgcgtgaagaagtcaccgaagaggaaata
accaagtggaagcataaggaggagctgaaaaggcagcatgaaggaaccacagacaattct
gcaaagaagatggagaggaggaataatgataaatcaatcctggatgcccgagctcgctac
cttgagagaaagcagcaaagagcacaaggtttaagcggcgcagtgaaagaaatgggatga

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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