KEGG   Columba livia (rock pigeon): 102099028
Entry
102099028         CDS       T02912                                 
Symbol
DHX36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
  KO
K14442  ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
Organism
clv  Columba livia (rock pigeon)
Pathway
clv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:clv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102099028 (DHX36)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clv03019]
    102099028 (DHX36)
Messenger RNA biogenesis [BR:clv03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     102099028 (DHX36)
SSDB
Motif
Pfam: OB_NTP_bind DEAD HA2_C Helicase_C HA2_N AAA_22 AAA_19 nSTAND3 ATPase AAA_14 Sir1 AAA_23 PhoH
Other DBs
NCBI-GeneID: 102099028
NCBI-ProteinID: XP_021149830
Position
Unknown
AA seq 910 aa
MDERREEQIVQLLNTVQTKNEKEQEAMSWWSGDEEGPAPEEPAKVKPEAEKAPVRQRPVL
EKTFLDRDVEYLFEKNEQDTDLDEQLKEDLRKKKSDPRYIEMQRFREKLPSYGMRQELVN
LINNNRVTVISGETGCGKTTQVTQFILDDYIERGKGSTCRIVCTQPRRISAISVAERVAA
ERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHLSSISHVVLDEIHE
RNLQSDVLMSIIKDLLNIRLDLKVILMSATLNAEKFSEYFDNCPMIHIPGFTFPVAEYLL
EDVIEKLRYTPENSDRRPRWKKGFMQGHVSRPEKEEKEALYRERWPEYLRQLRGRYSAGT
IDALEMMDDDKVDLDLIAALIRHIVLEEEEGAILVFLPGWDNISTLHDLLMSQVMFKSDR
FIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFD
TQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEE
LCLQIKILKLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQEELTPLGVHLARLPV
EPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELSKNTKSDHLT
VVNAFTGWEETRRRGFRTEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLAAGFVNSRDPKD
PKSNTNSDNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSVNVEE
TEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQDTIAVDEWIVFQS
PARIANLVKNLRKELDDLLQEKIENPHPVDWNDVKSRDTAVLTAIIDLITTQENESARNY
APRFQSERYS
NT seq 2733 nt   +upstreamnt  +downstreamnt
atggatgaacgcagggaagagcagattgtgcagctgttgaacactgtccaaaccaaaaat
gaaaaagagcaagaagccatgtcctggtggtctggggatgaagaaggacccgctccggaa
gagcctgcgaaagtgaaaccagaggctgaaaaagctcctgtgagacagagacccgtctta
gagaaaacattcctcgatcgggatgtggagtatctcttcgaaaaaaatgagcaagatact
gatttagatgagcaacttaaagaagacttaagaaagaagaaatctgatccaagatacatt
gaaatgcagagattccgagagaagcttccttcatacgggatgagacaggaacttgtaaac
cttataaacaacaacagagtaactgtgataagtggtgagacgggttgtggaaagacaacc
caagtcacacagttcatcttggacgattacatcgagcgagggaagggctcgacgtgcagg
atcgtgtgtacgcagcccaggaggatcagcgctatctccgtggctgagagagttgctgca
gaaagggcagaagcttgtggtaatggcaagagcacaggataccagattcggctgcagagc
cggttaccgaggaaacaaggttccattttatactgtaccacaggaattgtcctgcagtgg
ctccagtcagataagcacttgtccagcattagtcacgtagtccttgatgaaatccacgag
aggaatcttcagtcagatgttttaatgagcattattaaagatcttttgaatattcgtttg
gatctgaaagtcatactaatgagtgctactttaaatgcagagaagttttcggagtatttt
gacaactgtcccatgattcacatacctggcttcacgttccctgtggcagaataccttctt
gaagatgtcattgagaagttgaggtataccccggagaacagcgatcggcgcccgcggtgg
aagaaaggcttcatgcaaggacacgtaagcaggccagaaaaagaagaaaaagaggcactg
taccgggagcggtggccagagtacttacggcagctgcggggcaggtattcagcaggtacc
atagatgccttggaaatgatggatgatgacaaggttgaccttgatcttatagcagcactt
atcaggcacattgttttggaagaagaggagggagcaattctggtgtttcttccaggctgg
gacaatatcagcactctgcatgatctcttgatgtcgcaagtcatgtttaagtcagataga
tttattatcatacctttacactcattgatgccaactgttaaccagactcaggtgtttaag
aagaccccgccaggagtacggaaaatcgtgattgctaccaacattgcagagacgagcatc
acaatagatgatgtcgtgttcgttatagacggtggcaaaataaaggaaactcactttgac
acccagaacaacattagcacaatggcagcagagtgggttagtaaagctaatgccaagcag
aggaagggccgagcaggaagagttcaaccaggccactgttaccatctctacaatgggctg
cgcgcaagccttctggacgattatcagttaccggagatcctgaggacgcctctggaagag
ctctgtttacaaatcaagattctaaagcttggtggaattgcttattttctgagcaaacta
atggatcccccatctcgtgatgctgtaatgttggccatcaatcatctaatggagctgaat
gctttggacagacaagaagagctgactccactgggtgtccacttagcgcgattaccggtc
gaaccgcacattggaaaaatgatcctctttggagccttgttctgctgcttggaccccgtg
ctgaccattgcggccagcctcagcttcaaggaccccttcgtcattccgctgggcaaagag
aaagtagcagatgcaagaagaaaggagctgtcgaagaatactaaaagtgatcatctgact
gtggtgaatgctttcacgggctgggaagagactcggcgtcgtggtttccgaactgagaaa
gactattgctgggagtatttcctgtcttcaaataccctccagatgctgcataacatgaaa
gggcagttcgctgagcatctccttgcggctggatttgtgaacagcagagaccccaaggat
cccaaatctaataccaactcagataacgagaagttgctcaaagcggtcatctgcgctggt
ttatatccaaaagttgcaaagatccgtccaagctttagcaaaaagagaaaaatggtgaaa
gtttgcaccaagacagatggaacagttaatattcatcctaaatccgttaatgtggaagaa
acagagttccattataactggcttgtgtaccacttgaagatgagaaccagcagcatctac
ttgtatgactgtacggaggtgtctccatactgtctcttgttctttggaggagatatatcc
attcagaaggacaaagatcaggacaccatcgctgtggatgagtggattgttttccagtct
ccagcaagaatagccaacttagttaagaatttaagaaaagagctcgatgatcttctacag
gaaaaaatagaaaacccacatcccgtggactggaatgacgttaaatccagggatacggcg
gtgctgacagctattatagacttaatcacaacacaggagaacgaaagtgcccggaactat
gctccgcggttccagagcgaacgctatagttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (31)   

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