KEGG   Corynebacterium lactis: CLAC_01875
Entry
CLAC_01875        CDS       T04042                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
clw  Corynebacterium lactis
Pathway
clw03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:clw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CLAC_01875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:clw03021]
    CLAC_01875
   03400 DNA repair and recombination proteins [BR:clw03400]
    CLAC_01875
Enzymes [BR:clw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CLAC_01875
Transcription machinery [BR:clw03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CLAC_01875
DNA repair and recombination proteins [BR:clw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CLAC_01875
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_1 Peptidase_M23
Other DBs
NCBI-ProteinID: ALA66681
UniProt: A0A0K2GYY1
Position
446221..449691
AA seq 1156 aa
MAVSRQTKAVTGIPGASKRYSFAKIQEPIAVPGLLDLQRESFAWLVGSPEWRARRQEELG
EGVRVTSGLEDILEELSPIEDYSQKMSLTLSDPWFDSVKNTVDESKDKDINYSAPLYVTA
EFTNRETGEIKSQTVFIGDFPMMTDKGTFIVNGTERVVVSQLVRSPGVYFDESIDKSTER
PLHSVKIIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKAFGWTAEEIKERFGFSEI
MMTTLEKDGVANTDEALLEIYRKQRPGEPPTRESALALLENNFFKPKRYDLAKVGRYKVN
RKLGLGGDATGEMVLTEQDIATTIEYLVRLHDGEKTMTSPDGVEVPVEVDDIDHFGNRRL
RTVGELIQNQVRVGLSRMERVVRERMTTQDVESIQPTTLINVRPVSAAIREFFGTSQLSQ
FMDQNNSLSGLTHKRRLSALGPGGLTRDRAGLEVRDVHPSHYGRMCPIETPEGPNIGLIG
SLSCYARVNPFGFIETPYRRVVNGQITDEVDYLTADEEDRYVVAQANTPIDENGHFVQDT
LSVRKKGGDVESVRADEVDYLDVSPRQMVSVATAMIPFLEHDDANRALMGANMQRQAVPL
LRSEAPFVGTGMELRAAYDAGDVIVAPTAGVVETVSADFITIMDDEGQRHTFLLRKFERT
NQGTCYNQKPLVDEGQRIEAGQVIADGPGTDNGEMALGKNLLVAFMPWEGHNYEDAIILN
QRMVEQDILTSIHIEEHEIDARDTKLGPEEITRDIPNASEEMLKDLDDRGIVRIGADVRD
GDILVAKTTPKGETELTPEERLLRAIFGEKSREVRDTSMRVPHGESGKVIGVRVFSRDDD
DDLAPGVNEMVRVYVAQKRKIQDGDKMAGRHGNKGVIGKILPQEDMPFLPDGTPVDVILN
THGVPRRMNIGQVLEVHLGWLAKAGWAIEGDPEWAKRLPADLYDVPSDSLVATPVFDGAE
NEELAGLLASSRPNRDGEVLVNADGKATLFDGRSGEKFPFPVSVGYMYMLKLHHLVDEKI
HARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWAMQAYGAAYTLQELLTIKSDDVVGRVK
VYEAIVKGDNIPDPGIPESFKVLLKELQSLCLNVEVLSADGVPVELGSSDDEELDHATAS
LGINLSRDERSDADSA
NT seq 3471 nt   +upstreamnt  +downstreamnt
ttggcagtctcccgccagaccaaggcagtaaccggtattcccggagcttcgaagaggtac
tcgtttgcaaagattcaggaaccgattgcggttcctggtctgctagacctgcaacgtgag
tctttcgcatggctcgtgggctcccctgaatggcgcgcgcgtcgtcaggaggagctaggt
gagggcgtacgggtcaccagcggtcttgaagatattcttgaagagctctctccgatcgag
gactactcccagaaaatgtctctgacattgtcggacccctggttcgactcggtgaagaac
actgtggatgagtccaaggataaggacatcaactactcggctccgctgtacgtcaccgcg
gaattcaccaaccgcgagactggtgaaattaagagccagaccgtcttcatcggtgacttc
ccgatgatgactgacaagggcacgtttatcgtcaatggcaccgagcgtgtcgtcgtctct
cagcttgtgcgttccccgggcgtgtacttcgatgagtccatcgataagtccactgagcgc
ccgctgcactctgtgaaaatcattccgtcccgtggcgcttggctcgagtttgacgttgac
aagcgggataccgtcggcgttcgtatcgaccgcaagcgtcgccagcctgtgactgttcta
ctgaaggccttcggctggactgcggaggagattaaggaacgctttggcttctccgagatt
atgatgaccactttggagaaggacggtgtggccaacaccgatgaggccctgcttgagatt
taccgtaagcagcgcccgggtgagccgccgacacgtgagtccgctctcgctctgctggag
aataacttcttcaagccgaagcgctacgacctggctaaggttggtcgttataaggttaac
cgcaagctggggctcggcggggacgccaccggtgagatggtgctgacagagcaggacatc
gccaccaccatcgagtacctcgtacgcctgcacgatggagagaagaccatgacctccccc
gatggggtcgaggttccggtcgaggtcgacgacattgaccacttcggtaaccgccgcttg
cgtaccgttggcgagttgattcagaatcaggtccgcgtcggcctgtcgcgcatggagcgc
gtcgtacgcgaacgcatgaccactcaggacgttgagtcgatccagccgaccaccctgatt
aacgtgcgtccggtctcggcagctatccgcgagttcttcggtacttcgcagttgtcccag
ttcatggatcagaacaactccctgtctggcctgacccataagcgccgtctgtcggccctg
gggccgggcggcctgacccgtgaccgtgcaggtcttgaagtccgtgacgttcacccgtcc
cactacggccgtatgtgcccgattgagaccccggaaggtccgaacattggcctgattggt
tcgctgtcctgctacgcgcgcgtaaatcccttcgggttcattgagactccttaccgccgc
gtggtcaacggccagattaccgatgaggtcgactacctcaccgctgacgaagaggaccgc
tacgtcgtcgcgcaggcgaacacccctatcgacgagaatggccacttcgtccaggacacc
ctgtctgtccgtaagaagggtggtgacgtcgaatcggttcgcgccgacgaggttgactac
ctggacgtttccccgcgccagatggtgtcggtcgcaaccgcgatgattccgttcctcgag
cacgacgacgctaaccgtgccctcatgggcgcgaacatgcagcgccaggcagtgccgcta
ctgcgctcggaggctccgttcgttggtaccggtatggagctgcgcgcagcttacgacgct
ggcgatgtcatcgtcgcgccgactgccggcgttgtcgagaccgtctccgctgacttcatc
acaatcatggacgatgagggccagcgccacaccttcctactgcgcaagttcgagcgcact
aaccagggcacctgctacaatcagaagccgctggtcgacgagggacagcgcatcgaagcc
ggccaggtcatcgccgatggtccgggcactgacaacggcgaaatggcgctgggcaagaac
ctgctcgtcgccttcatgccgtgggaggggcacaactacgaggacgccatcatcctcaac
cagcgcatggttgagcaggacatcctcacctcgatccacatcgaggagcacgagattgac
gcccgcgacaccaagctggggccggaggagatcacccgcgacatcccgaacgcatccgag
gagatgctgaaagacctcgacgaccgcggcatcgtccgcatcggcgccgacgtccgcgat
ggtgacatcctcgtcgcaaagaccaccccgaagggtgagaccgagctgactccggaggag
cgcctgctgcgcgccatcttcggcgagaaatcccgtgaggtgcgcgatacctctatgcgc
gtgccgcacggcgagtccggtaaggtcatcggtgtccgcgtcttctcccgtgacgacgat
gacgacctggctcccggcgtcaacgagatggtccgtgtctacgtcgctcagaagcgtaag
attcaggacggcgataagatggcaggtcgccacggtaacaagggtgttatcggcaagatc
ctgccgcaggaggacatgccgttcctgccggacggtaccccagtcgacgtcatcctgaac
actcacggtgttccgcgtcgtatgaacatcggtcaggtcctcgaagttcatctcggctgg
ctggctaaggccggttgggctatcgagggggacccggagtgggcaaagcgcctcccggcc
gatctctacgatgtgccgtccgattctctcgtcgccaccccggtgttcgacggtgctgag
aacgaggagctcgcaggtctgctggcttcttcccgtccgaaccgcgacggcgaagtactg
gtcaacgctgacggtaaggccaccctgttcgacggtcgttccggcgagaagttcccgttc
ccggtgtctgttggctacatgtacatgctgaagctgcaccacttggtcgacgagaagatt
cacgctcgttccaccggtccgtactccatgattacccagcagccgctcggtggtaaggcc
cagttcggtggccagcgcttcggcgaaatggaggtgtgggcgatgcaggcatacggtgcc
gcctacaccctgcaggagctcctgaccatcaagtcggatgacgtggtcggccgtgtgaag
gtctacgaggcaatcgtgaagggcgacaacattccggatccgggtattccggagtcgttc
aaggtgcttctgaaggaattgcagtcgctgtgcctgaacgttgaggtcctttcggccgat
ggcgttcctgtggagttgggctcctccgatgacgaggaactcgaccacgcgaccgcgtcc
cttggcattaacctgtcccgcgacgagcgttccgacgctgactccgcatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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