KEGG   Caldivirga maquilingensis: Cmaq_0109
Entry
Cmaq_0109         CDS       T00611                                 
Name
(GenBank) DNA topoisomerase type IA central domain protein
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
cma  Caldivirga maquilingensis
Brite
KEGG Orthology (KO) [BR:cma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cma03032]
    Cmaq_0109
   03400 DNA repair and recombination proteins [BR:cma03400]
    Cmaq_0109
Enzymes [BR:cma01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Cmaq_0109
DNA replication proteins [BR:cma03032]
 Prokaryotic type
  DNA Topoisomerases
   Cmaq_0109
DNA repair and recombination proteins [BR:cma03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Cmaq_0109
SSDB
Motif
Pfam: Topoisom_bac Toprim Toprim_4 Toprim_2 IlvC
Other DBs
NCBI-ProteinID: ABW00963
UniProt: A8MA31
Position
complement(133817..135649)
AA seq 610 aa
MDKLIVAEKNSVAKAIAQYLAEGGYTLRRIGIVPVYFFKVNGEYWASMGLRGHILDFDFE
HSYNNWNRVEPGKLLDLEPVMVIRGWDRPYVTALVELSKQAREIILALDSDVEGEAIAYE
VMLVTRLRKPTLRFRRALFSAVTRDDIRRAFSKLTTINVNLARKVFTRMVIDLKYGATFT
RLLTLSAKSSKAPLNRGEFLSYGPCQTPVLNLVVQRALERENFKPEVYYKIKLIIEANGE
LIELESIDKFKNLKEAQEALSRVKAGKAVVKNIEAKRVHVNPPKPLETVELERRASRFLN
IRSKQTLDAAEELYRQGYISYPRTETNIYPPTLDLRGILRNLTSTSTYGQYARHLLAGEL
RPTAGKDNDNAHPPIHPVKAADKPELMARFRDFKYWLIYDLVVRHFLATLSPPALIEEQR
LTVDAGGVLFEASGLRIINDGYFTIYPFERPRANPLPLSALRIGMQVTVKDAKVVKRKTT
PPPYLSESELLRLMRKYGIGTDATMQDHIHTNVKRRYFKIIKGQCVPTPLGKALITSLSK
YAPTLIDPNFRSRMESMLSLIGSGKEMPDSVRRRLEEEAARVYTSMKPNSNQLGEELAKA
LRSMVNEKGA
NT seq 1833 nt   +upstreamnt  +downstreamnt
atggataagttaattgttgctgaaaagaacagtgtggctaaggctatagcccaatactta
gctgagggtggatacacattaaggagaattggtattgtacccgtctacttctttaaggtt
aatggggagtattgggcatccatgggcctaagggggcatatccttgacttcgactttgaa
cactcctataataattggaacagagtggagccgggtaagctccttgaccttgagccagta
atggtgattaggggttgggataggccgtacgtaacggcgttggttgaattatcgaagcag
gctagggaaattatcctcgccctagactctgatgttgagggtgaggcaatagcctacgag
gtaatgcttgtgactaggcttaggaaacccaccttaaggtttaggagggcattattctca
gcggtcactagggatgatattaggagggcattcagtaagttaacaacaatcaacgttaac
cttgctaggaaggtcttcaccagaatggttattgaccttaagtacggtgcaacattcact
aggctattaaccttaagcgccaagtcaagtaaggcgccattaaataggggtgagttccta
agctacggcccctgtcaaacaccggtgcttaacctagttgttcaaagagccttggagagg
gagaattttaagcctgaggtttactataagattaaattaatcattgaggctaacggtgag
ttaattgaattagagtccattgataagtttaagaaccttaaggaggcccaggaggcgctt
agtagggttaaggcaggtaaggcggtggttaagaatattgaggctaagagggttcacgtt
aatccacctaagccccttgaaaccgtggagcttgagaggagggctagtagattcctcaac
attaggagtaagcagacccttgatgcagcagaggagctttacaggcagggttacatatcc
tacccaagaactgaaaccaacatttacccacccaccctggatttaaggggtattttaagg
aacctaacctcaacgtcaacctacggtcaatacgcaaggcatctactggctggtgaatta
aggcctactgcaggtaaggataatgataacgcccacccgccaatacacccggttaaggct
gctgataagcctgagttaatggctaggttcagggactttaagtactggctcatatacgac
ctggtggttaggcatttcctagcaaccctaagtcccccagccttaattgaggagcagagg
cttactgttgatgctggtggagtactcttcgaggcttcaggcctcaggatcattaatgac
ggctacttcacgatttaccccttcgagagacctagggctaatccactacccttaagcgca
ttaaggattggtatgcaggtcactgttaaggatgctaaggttgttaagaggaagaccacg
ccgccaccctacttaagtgaatcagagttgcttaggttaatgaggaagtacggtataggt
acagacgccactatgcaggaccacatacatactaacgttaagagaaggtacttcaagata
attaaggggcagtgtgtacccacaccgcttggtaaagcgttaataacctcattatccaag
tacgcaccaacgttaatagacccaaacttcaggagtaggatggagtccatgctttcactc
attggttcagggaaggagatgcctgactcagtgaggaggaggcttgaggaggaggccgct
agggtttacacctcaatgaagcctaattctaatcaactcggggaagaattagctaaggcg
ttgagaagcatggttaatgaaaagggcgcttaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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