KEGG   Cucurbita maxima (winter squash): 111479749
Entry
111479749         CDS       T05246                                 
Name
(RefSeq) ubiquitin receptor RAD23d-like
  KO
K10839  UV excision repair protein RAD23
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03420  Nucleotide excision repair
cmax04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111479749
  09124 Replication and repair
   03420 Nucleotide excision repair
    111479749
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:cmax03051]
    111479749
   03400 DNA repair and recombination proteins [BR:cmax03400]
    111479749
Proteasome [BR:cmax03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    111479749
DNA repair and recombination proteins [BR:cmax03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      111479749
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin Rad60-SLD CUE Dsc3_N Rad60-SLD_2 TECR_N
Other DBs
NCBI-GeneID: 111479749
NCBI-ProteinID: XP_022980399
UniProt: A0A6J1IZ65
Position
Unknown
AA seq 409 aa
MKIFVKTLKGSHFEIEVQPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD
ENKVSENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA
PPATVTDSSPPAPPALAPAPAPATVPATPVLAESDVYSQAASNLVAGSNLEDTIQQILLM
GGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQATNPSAQPAQP
AQPAQPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMVRA
NPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITVTP
EEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
NT seq 1230 nt   +upstreamnt  +downstreamnt
atgaagatttttgtcaagactctcaagggctcgcacttcgaaatcgaagttcagcctgaa
gatatggttgctgatgtgaagaaaaacatagaaactgttcagggtgctgatgtttaccct
gctgctcagcagatgcttatccatcaagggaaagtccttaaagacggcacaacactggat
gaaaataaagtttccgaaaatagttttattgtaataatgttaacaaagaataaaagttca
tcgggtgggacatcttctaccacacaagctgcgccagtatcgaaggcaccacagaacact
gcccctgcacctgctgccactccagtgtcaacgtcggaagttcctctaccaacatcagca
ccgcctgctactgttaccgactcttctcctcccgctcctccggctctggctccagctcca
gctccagctacagttcctgcaacccctgttttggcagaatccgatgtctacagccaagca
gcttctaacctggttgctggtagtaacttggaggacactatccaacaaattcttctcatg
ggcggagggatttgggacagagacactgttgttcgagctcttcgtgctgcttacaataat
ccagaaagggctgttgattacctttattctggaatacctgaacaacttgaaaccccacct
gctgctggagttccgtctactgtgcaagcgaccaacccttcagcccaacctgcacagcca
gcccaacctgcacagccagcccagcctgcatctgtgacgtcaactggcccaaatgctaat
ccattagatctctttcctcagggtttgcctaatatatcttccggagctgttggttccggc
agtcttgattttctacgaaatagtcctcagttccaagctttgcgagcaatggtgcgagct
aatcctcagatactccagcctatgcttcaagagttgggtaaacaaaatcctcagttgatt
aggcttattcaagatcatcaacctgacttcctccgcttgattaatgagccccttgaagga
gaagggaatatacttgggcagcttgctgaggctatgccgcaggctataactgtaaccccg
gaggagcgtgaagccattcaacggcttgaggatttgggcttcgatagagctctagtagtg
gaggttttcttcgcctgcaacaagaacgaggaaatggctgccaactatcttttagatcat
atccacgaatttgagggtaatcagaattag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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