KEGG   Cucurbita maxima (winter squash): 111480130
Entry
111480130         CDS       T05246                                 
Name
(RefSeq) ATP-dependent helicase BRM-like
  KO
K11647  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    111480130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmax03021]
    111480130
   03036 Chromosome and associated proteins [BR:cmax03036]
    111480130
Transcription machinery [BR:cmax03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     111480130
Chromosome and associated proteins [BR:cmax03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    REST complex
     111480130
  Chromatin remodeling factors
   BAF complex
    111480130
   PBAF complex
    111480130
   GBAF(ncBAF) complex
    111480130
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD QLQ HDA2-3 AAA_14
Other DBs
NCBI-GeneID: 111480130
NCBI-ProteinID: XP_022980865
UniProt: A0A6J1IXS2
Position
Unknown
AA seq 2255 aa
MQSGGGGPLRNPGFPAGRAASTSAAASPSSSSSAVSTPHLGFDSMQQQLASRQSLQQQLL
RKSDGNEALLSYQAGGLQGVLVGNNFPQSPGSSHLPQQARKFMDMAQQHHSSSQESQNRS
QGLEQQAMNHPMHQAYLQYALAAQQKSAMAMQSQHQAKMGIMSPRSLKDQEMRIGNQKIQ
ELIPAQVSNQASTSLSKNSADHFVRGEKQMEQGQPSTSDQRGDPKSSNQFPAMGNLMPVN
MTRSMQAPQAQPGIPNMANNQLAMAQMQAMQAWALERNIDLSLPGNANLVSQILPLIQSR
MVPHQKGNENNMGSQLSPASVSKQQTNSPFAGKEASAHANSLSDVSGQSSSTKARQIAST
SPFGQNMNASVVNNTSHASMQQFSVPGMENQLPSRTPVSGNTIPPVHSSESSGNVNQSTE
RPLQGKTSLNSPENLQTQYVRQVNRSSPQTALPPSDAGPSSSTLPQGGHSNQTEQQKFGF
TKHQLHVLKAQILAFRRLKKGEGTLPQELLRAIAPPPLDVQLQQQFLSPGGTSQDKPSGN
IMEERGSGEVTEKDSLSLASSTGHRFPREEVSTGDEKSKMPTMDVQPMPLAMKETVPLGS
SGNDEQQAAVSVKSDQEIDHGCQKPPAKSNFPVERGKAIANQAAVPDVTQAKKPAPPSTP
PQSKDVGAARKYHGPLFDFPYFTRKHDSFGSAMAVNNNNNLTLAYDVKDLLFEEGLEVIN
KKRKENLKKIGGLLAVNLEQKRIRPDLVVRLQIEEKKLRLLDLQARLRDEIDQQQQEIMA
MPDRPYRKFVRLCERQRMELTRQVQASQKAMREKQLKSVFLWRKKLLEAHWAIRDARTAR
NRGVAKYHERMMREFSKRKDDDRNRRMEALKNNDVERYREMLLEQQTSMPADAAERYSVL
TSFLTQTEEYLHKLGNKITAAKSQQEVAEAAKIAAAAARLQGLSEEEVRSASACAGEEVM
IRNRFMEMNAPRDSSYVNKYYNLAHAVNERIARQPSMLRAGTLRDYQLVGLQWMLSLYNN
KLNGILADEMGLGKTVQVMALIAYLMEFKGNNGPHLIIVPNAVLVNWKSELHTWLPSVSC
IYYVGGKDERSKLFSQEVCALKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRE
SVLARDLDRYKCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSKPFQKEG
PTQNVEDDWLETEKKIIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAFQSA
IYDWIKSTGTLRVDPEDEKLRVQKNPNYQPKVYKTLNNRCMELRKTCNHPLLNYPYYGDL
SKDFLVRSCGKLWILDRILIKLQKTGHRVLLFSTMTKLLDILEEYLQWRRLMYRRIDGTT
SLEDRESAIVDFNSPDSVCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARA
HRIGQTREVKVIYMEAVVDKISSHQKEDELRSGGSGDLEDDFAGKDRYMGSIESLIRNNI
QQYKIDMADEVINAGRFDQRTTHEERRLTLETLLHDEERYQETVHDVPSLQEVNRMIARS
EEEVELFDQMDEELDWTEEMTRYDQVPKWIRASTREVNTAIANLSKRPSKNILFGGGYGL
ESSELGSELSLRTERKRGRPKGKKIPNYKEMDDDNGEFSEESSDERNGYSVQEEEGEIAE
FEDDEFSRGIEVTQLNQDQMEDGAVRDARYDYPRASDIARNNHLLEEAGSSGSSSSSRRL
TQLMSPVSSQKFGFLSALDARPSSLSKRLPDELEEGEIAISGDSHMENQLSESWIHDRED
GEEEQVLQPKIKRKRSLRLRPRPPAERREEKIYSETQSLQYGDSSSPSPFLADHKFTKFK
NDPEAKPYGDSNSLKHEQNESSSKTRRNLSARKTGPTSKFHSSPKSSRLNSLTGSTEDAV
EHNRESGDGKPLNVGGNSAFGSKMPDIIQRRCKNVISKLQSRIDKEGHQIVPLLTDLWKR
IQNSSIPSGVSNNILDVRKIDQRIDRLEYNGVMELVFDVQFMLKGAMQFYGFSYEVRVEA
KKVHDLFFDILKIAFPDTDFREARNALPFSSPGSSAAAASLRERPVSQTKRQKMINDMDA
DSGPPRKSLQRGPMSREETRATRGHLLAQKESRFGSGSGSKDQYETEEPPILTHPGELVI
CKKKRKDREKSIVRPRTASGGPVSPPSVARGIRSPGPGSVSKDSKQSHPSSHSQGWSNQP
QSAKGGGGGGGGPVSWANPVKRLRTDSGKRRPSHI
NT seq 6768 nt   +upstreamnt  +downstreamnt
atgcaatcgggtgggggtggccccctccggaatccggggtttccggccggacgggcggca
tcgacatcagctgcggcgtcgccgtcgtcatcgtcgtcggcggtgtcaacgccgcatttg
ggctttgattcaatgcagcagcagctagcgtctaggcagtcgctacaacaacaattactc
agaaaatctgatggaaatgaagcccttctatcttatcaagctggtggtctccaaggagta
ttagttgggaacaactttcctcagtcacccggttcgtcgcatttgcctcagcaagcgaga
aaattcatggatatggctcaacagcaccatagttcctctcaggagagccaaaacaggagc
caaggacttgagcagcaagcaatgaatcatcctatgcatcaagcttatctgcaatatgcc
ttggctgctcagcagaagtctgcgatggctatgcaatcgcagcatcaggctaaaatggga
attatgagccctcgctctctcaaggatcaggagatgcgaattggaaatcagaaaattcag
gaacttattccggctcaggtgtctaatcaagcatcgacatctttatctaaaaactcagca
gatcattttgtacgcggtgaaaaacaaatggagcagggacaaccatcaacttctgatcag
agaggcgatccaaaatcttctaatcagtttcctgccatgggcaatttgatgcctgtgaat
atgaccaggtctatgcaggcaccacaagctcaaccgggaatccctaacatggcaaacaac
cagcttgctatggcccagatgcaggctatgcaagcatgggctctagaacgcaatattgat
ctttcactacctggaaatgcaaacttggtttcacagattcttccactgatacagtctaga
atggttcctcatcaaaaaggaaatgaaaacaatatgggatcacagttatctcctgcttct
gtctccaaacagcagaccaattctccgtttgctggaaaagaggcttctgcccatgctaat
tcattgagtgatgtatcgggacagtcaagcagcacgaaagccaggcagatagcttcaaca
agcccttttggtcaaaacatgaatgccagtgttgttaataacactagccatgccagcatg
cagcagttcagcgttcctggcatggaaaaccaattaccttctagaacaccagtttctggg
aatacaatacctccagtacattcttctgaatcatctgggaatgtgaaccaaagcactgaa
cgtccacttcaaggaaaaacatcgttaaatagcccagagaatttgcaaacacagtatgtc
aggcaggtgaatcgatcgtctccgcagactgctcttcctcctagtgatgcgggtcctagc
agttctaccttaccacaaggtggacactctaatcagacagaacaacagaaatttggtttc
accaaacatcaattgcatgtcttaaaagcccaaattctagcatttaggcggctgaagaaa
ggagaaggtacactgccacaagagcttctaagggctattgctccaccacctctggatgtg
cagctgcagcagcaatttctatctcctggaggtactagtcaggataaaccatctgggaat
attatggaagaaagggggagtggggaggttactgaaaaggactccctgtctcttgcatcg
agtaccgggcatagatttccaagagaggaagtttcaactggagacgaaaaatcaaagatg
ccaactatggatgtgcaacctatgccccttgcaatgaaggaaacagttcctttgggatct
tccggaaatgatgagcaacaggcagcagtctctgttaaatcagatcaggaaattgatcat
ggttgtcaaaagcctcctgctaaaagtaattttccagtagaaaggggaaaggctattgca
aaccaagctgctgtaccagatgttacacaagctaagaaaccggccccacctagtactcca
ccccagtcaaaagatgttggcgctgctaggaagtatcatggacccctttttgacttccca
tacttcactaggaagcatgactcgtttggttcggcaatggcagttaataacaataataat
ttaacattggcttatgatgtcaaagatcttctctttgaggaaggtctggaagttattaat
aagaaaaggaaagaaaatttaaagaagattggtgggttactggctgtcaacttagagcag
aaaagaatccgacccgatttggtagtacgattgcaaattgaagaaaagaagcttcgactt
ttagatctacaggcacgcctaagggatgaaattgatcaacagcagcaagagataatggca
atgcctgataggccctataggaagtttgtgcgcctatgtgaacgccaacgtatggagcta
actcggcaagtacaagcctctcagaaagccatgagagaaaagcaactgaaatctgtcttt
ctgtggcgtaaaaaacttctagaggctcattgggccatccgtgatgctcgcactgcacgt
aatagaggagttgccaaatatcatgagagaatgatgagagagttttcgaaaagaaaagat
gatgatagaaacagaaggatggaggctttaaagaacaatgatgttgaaagatatagagaa
atgttgttggagcagcagacaagcatgcctgctgatgctgctgaaagatattctgtcctg
acctcatttttgactcagacggaagaatatcttcataagctaggaaacaaaataacagca
gccaagagtcaacaggaggtggcagaggccgcaaagattgctgcagctgctgcccgattg
cagggtctttcagaagaagaagttaggtcggcatctgcttgtgcaggagaggaagttatg
ataagaaaccgttttatggaaatgaatgctccgagggatagttcatatgtgaacaagtac
tataaccttgctcatgctgtgaatgagagaatcgcgaggcaaccctcaatgttacgggct
ggaaccttgagagactatcagcttgttgggttacaatggatgctttcactgtataacaat
aaattaaatggaatcttggccgatgagatgggtcttgggaagacggtgcaggtaatggcc
ttgattgcttatttgatggaatttaaagggaacaatggccctcatctcataattgtcccc
aatgctgttttggtcaactggaagagtgagctccatacatggctaccatctgtatcatgc
atttattatgttggtgggaaggatgaacggtcaaaattattttcacaagaggtttgtgcc
ttgaaatttaacgttctcgtgacaacttatgagtttatcatgtatgatcgctcaaagctg
tcaaaaattgattggaagtatattataattgatgaagcacaaagaatgaaggatagggaa
tcagttctagctcgtgaccttgataggtacaaatgccagaggcgcctgctcctaactggg
acgccattacagaatgatttgaaggaactatggtcgctgcttaatctgcttcttccagaa
gtgtttgataatcgaaaagcttttcatgattggttctcgaaaccctttcagaaggaaggc
cctacccagaatgttgaagatgattggcttgagacagaaaagaaaattattattatccac
cgacttcatcaaattcttgaaccttttatgctccgtcgtcgtgttgaagatgttgaagga
tcacttccaccaaaggtttccatagtgttgaggtgtaggatgtcagcctttcagagtgct
atatatgactggattaagtccactggcactcttcgtgttgatccggaagatgagaaactg
agagttcagaaaaatccgaattaccaacctaaggtatataaaacattaaataatagatgc
atggaactaaggaaaacttgtaaccaccctttgctcaactatccatattatggtgactta
tccaaggacttccttgtaagatcatgtggaaaactgtggatcctggataggatccttata
aaacttcagaaaacagggcatagagtacttctctttagtacaatgacaaaactacttgat
atattagaggaatacttgcaatggcgacgacttatgtatagaagaattgatggaacgact
agtttggaggatcgtgaatctgccatagtggacttcaatagtcctgattctgtctgcttt
atattcttactaagtatacgagctgcaggtcgtggtcttaatcttcaatctgctgacacg
gttattatttatgaccctgatcctaacccaaaaaacgaggagcaagctgttgctagagct
caccgtattggacaaacaagagaagtcaaagtcatctacatggaagcagtagttgacaaa
atctctagtcatcagaaagaagatgaactaagaagtggcgggtctggtgatttagaagat
gattttgctggcaaggatcgatatatgggatccatcgagagtcttataaggaataacatt
cagcaatataagatagatatggcagatgaggtcattaatgctgggcgttttgaccagaga
acaacacatgaagaaaggcgcctgactttagagacattgttgcacgatgaagagcgatat
caagaaactgttcatgatgtaccgtcacttcaggaggtgaatcgaatgattgctagaagt
gaagaggaggttgaactgtttgatcaaatggatgaagaacttgattggaccgaggaaatg
acgaggtatgaccaggtaccgaagtggattcgagcaagtacaagagaagtgaatactgcg
attgctaatttatcaaaaagaccttcaaaaaatatattgtttggtggtggttatggcttg
gagtccagtgaacttggctctgagttgtccctcagaaccgaaagaaaaagaggccgacca
aagggtaaaaagatccccaattacaaggaaatggatgacgataatggagagttctcagaa
gaaagttccgatgagagaaatgggtactctgtccaggaagaagagggagaaattgctgaa
tttgaagatgatgaattcagtagaggtattgaggtgacacaacttaaccaggatcagatg
gaagatggtgcagttcgtgatgctaggtatgattatcctcgggcgtcagatatcgctaga
aataatcatttgcttgaagaagctggctcttccggctcctcttccagcagtcgaaggttg
acacagttgatgtcgcccgtttcttctcagaaatttggcttcttgtctgccttagatgcc
aggccgagttccctctcaaagagactgcctgatgaactagaggaaggggaaattgcaata
tctggcgactctcatatggagaaccaactatcagaaagttggattcatgatcgtgaagat
ggcgaagaggagcaggtactgcaacccaagataaaacgtaaaaggagtcttaggcttagg
ccacgccctcctgcagaaaggcgagaagagaagatatatagcgaaacacaatctcttcaa
tatggagattcttcgtctccttctccgtttctagcagatcataaatttaccaaatttaag
aatgatcctgaggctaaaccatatggagattctaattccttgaagcatgaacaaaacgaa
tcatcttcaaagactcggcgtaatttgtctgctagaaagacaggtcctacatcaaaattt
cactcttctcctaaatctagcagattaaattctttgactggatccacagaagatgccgtt
gaacacaatagagaaagtggggatggcaaaccattgaatgttggtggaaattcagctttt
ggttctaagatgccagacataatccagaggaggtgcaagaatgttatcagcaagcttcag
agtagaatcgacaaggaagggcatcaaattgtgccgttgttaacagatttgtggaaacgg
atccagaactctagcataccaagtggagttagtaataacattttggatgtacggaagatc
gatcaacgtatagacagattggagtacaatggagttatggagttagtgtttgatgttcag
ttcatgttgaagggtgctatgcagttttatgggttttcatatgaggttagagttgaggcc
aaaaaagttcatgacctcttctttgatattctgaagattgcatttccagacacggatttt
cgagaagctcggaacgctctgcctttctctagcccggggtcttctgctgctgctgcttct
ttgagggagagacctgtcagccaaaccaaaagacagaagatgataaatgatatggacgct
gactcaggcccgccccggaaatcactgcagcgtggacctatgtctagggaagaaacaagg
gccaccagaggtcacttgttggcacagaaagaatcaagatttggcagcggaagtggaagt
aaggatcaatatgaaacagaagaacccccaattcttactcatcctggggagctagttatc
tgcaagaagaaaagaaaagacagggaaaaatcaatagtcaggccaaggactgcatctggc
ggcccggtctcgccgcctagcgttgcccgtggcattagaagtccaggtcccggttcagta
tccaaagacagcaaacaatctcacccctcttcacattctcaaggatggtccaaccagcct
caatctgctaaagggggcggcggcggcggcggcggacctgtgagttgggcaaatcctgtg
aagagattaagaacagattcaggaaagaggaggcccagccatatctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system