KEGG   Cucurbita maxima (winter squash): 111492615
Entry
111492615         CDS       T05246                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    111492615
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cmax01009]
    111492615
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmax03019]
    111492615
   03036 Chromosome and associated proteins [BR:cmax03036]
    111492615
Protein phosphatases and associated proteins [BR:cmax01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     111492615
Messenger RNA biogenesis [BR:cmax03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     111492615
Chromosome and associated proteins [BR:cmax03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     111492615
SSDB
Motif
Pfam: WD40 ComGF DUF4213
Other DBs
NCBI-GeneID: 111492615
NCBI-ProteinID: XP_022997753
UniProt: A0A6J1KEU0
Position
Unknown
AA seq 510 aa
MKGGDEAMPAPAASSQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKMGDHLATGDRGG
RVVLFERTDRKDHGGTRKDLEKKDHSVSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK
IRWCQTANGALFLLSTNDKTIKFWKVQEKKIKKISSMNVDASKAVGNGCIASSSSSSPHL
PNGGSCDGLYNHPSNDLLGAISSLRLQLVTSQETSLLARCRRVYAHAHDYHINSISNNSD
GETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITAAEFHPTHCNMLAYSSSK
GSIRLVDLRQSALCDSHAKLFEEPEAPGSRSFFTEIIASISDIKFGKNGRYILSRDYMTL
KLWDINMDSGPVTTFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLHITTGSYSNLFRV
FGSSPGSTEATTLEASKNPTRRQVQTPSRPSRSLGSSLTRVVRRAGSESPGVDANGNPFD
FTTKLLHLAWHPVENSIACAAANSLYMYYA
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgaaaggtggcgatgaagctatgccagctccggcggcctcctcacagcctctggagtgg
aaattctcgcaggtgtttggtgaacgtaccgccggtgaagaagtacaggaagttgatatt
atttcagccattgaatttgataaaatgggcgatcatcttgctactggcgatcgaggtggt
cgagtggttctttttgagaggactgatagaaaagatcatggaggaacgagaaaggacttg
gaaaaaaaggaccattcagttagtaggcatcccgagttccgttataaaacagagttccag
agccatgaacccgagtttgactacctcaagagcttggaaatagaggagaaaattaacaaa
atcagatggtgtcaaacggccaatggagcactctttttattgtctacgaatgataaaacc
attaagttttggaaggtgcaagaaaaaaagatcaagaaaatatccagcatgaatgtggac
gcttccaaagctgttggcaacggatgtatagctagttcaagtagttcttcaccacatctt
ccaaatggaggatcatgtgatggactttataatcatccaagcaatgacctattgggagcc
atttcgtcacttcgtcttcaactggtaactagccaagagacgagccttcttgctagatgt
cgaagagtatatgctcatgctcatgattatcacatcaactctatctcaaataacagtgat
ggtgaaacctttatatcggctgatgatctgcgaataaatctttggaatttggaaattagc
aatcaaagtttcaacattgttgatgtaaagcctgctaacatggaggatttaactgaggtg
attacagctgctgagtttcaccctacacactgtaacatgctagcatatagcagctcaaaa
ggctcaatccgcctagttgatttgcggcagtcagcattatgtgattcccatgccaaatta
tttgaggaacctgaggcacctggttctagatcatttttcactgagataattgcttcaatc
tctgacattaaatttggaaagaacggaagatatatattaagtcgtgattacatgaccctt
aagttatgggacatcaatatggattctggtccggttactaccttccaagttcatgaatat
ttaagacccaagctttgtgatttatacgaaaatgattcgatctttgacaagtttgagtgt
tgtctgagtggtgatggattgcatataactacaggttcctacagcaatttattccgagtt
tttggttcttcccccggaagtaccgaggcaacaactttggaagctagcaaaaacccaact
aggagacaagtgcagaccccttcaagaccttcaagatcacttggtagtagtttaacgaga
gttgtgagacgagcaggatctgagagcccaggggttgatgcaaacggaaatccttttgat
ttcactactaagctgctgcatctagcatggcatccggttgaaaattcaattgcctgtgct
gccgcaaacagcttgtacatgtattatgcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system