KEGG   Cucurbita maxima (winter squash): 111499907
Entry
111499907         CDS       T05246                                 
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2-1-like isoform X1
  KO
K15322  tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
Organism
cmax  Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cmax03016]
    111499907
Enzymes [BR:cmax01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     111499907
Transfer RNA biogenesis [BR:cmax03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    111499907
SSDB
Motif
Pfam: tRNA_int_endo tRNA_int_endo_N
Other DBs
NCBI-GeneID: 111499907
NCBI-ProteinID: XP_023007399
UniProt: A0A6J1L4U3
Position
Unknown
AA seq 241 aa
MGPRWKGKGSEAKALADPMSKIVCQLQSSLIQSDAQGLLSSCSVLYQADEEQAELLNRAC
FGRPIVSAEKDKQWFQFGMEEAFYLCYHLNCLKIVDGQDCETNFEELWHYMKSQNATFPE
FYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGSNENGRLRVWS
DFLCTIRLCGSVAKTLLVLTVNSNGNRSVSPSCLDSYSIEERTVTGWSPEQCRENPATKS
M
NT seq 726 nt   +upstreamnt  +downstreamnt
atggggccgagatggaaagggaagggttcggaagccaaagctctagcagatcccatgtcg
aagattgtatgtcagctccagtcttctctaatacaatctgacgctcaaggattactatct
agttgtagtgtactttatcaagcggatgaagaacaagccgaacttcttaatcgcgcttgt
ttcggtcgaccaattgtttccgccgagaaggataagcaatggtttcaattcggcatggag
gaggctttttacttgtgttatcatttgaattgccttaaaattgtggatggacaggattgt
gaaacgaatttcgaagaactctggcattatatgaagtcgcaaaacgctacattccctgag
ttttacaaggcttatcaaaatcttcggatgaagaattgggttgtgagacctggatctcaa
tacggagttgattttgttgcttaccgtcaccatccggctctcgtccactctgaatttgct
gtgcttgtgttgtccgaaggagaaggaagtaatgaaaatgggagattgagagtttggtct
gattttctttgcacaattcggctttgtggaagcgttgcaaaaactctgctagttcttact
gtcaatagcaatggaaaccgttctgtttctccttcgtgtttggacagttactccattgaa
gagcgcacagttacgggatggagtccagaacagtgccgcgaaaatcctgcaacgaagtca
atgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system