KEGG   Corynebacterium maris: B841_10055
Entry
B841_10055        CDS       T02784                                 
Name
(GenBank) ribonuclease E
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
cmd  Corynebacterium maris
Pathway
cmd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cmd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B841_10055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmd03019]
    B841_10055
   03009 Ribosome biogenesis [BR:cmd03009]
    B841_10055
Enzymes [BR:cmd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     B841_10055
Messenger RNA biogenesis [BR:cmd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     B841_10055
Ribosome biogenesis [BR:cmd03009]
 Prokaryotic type
  rRNA processing factors
   B841_10055
SSDB
Motif
Pfam: RNase_E_G IF2_N S1 TcdA_TcdB
Other DBs
NCBI-ProteinID: AGS35483
UniProt: S5TLD0
Position
complement(2183577..2186786)
AA seq 1069 aa
MATNDTTDAHDDNDKESTPTPKRRATRKTTRKTVKKTAPAAKKTTKKTTKKSVKKTAKKT
AAPAQPTTSPAESATSLDRAALAEKTRVHALAKQLGMTSKELIVALDAVGLVKVAQSALS
REEAGRVLDHLAGVDPTPPAAEPEQAPAAQEDTAEPAEQAEPEQKIRTRVRKNVENEIHQ
IEAKVDADLADAVEDAHSDEPLEDVTPEITPAPEDKPAAAAYAPLFVAPAADTPTRSKDR
DDQDEDDATPAKRSPASSRRRARRSTRAAAPAETTAQTEPTEPAAPADQVDETRQEEEAD
LPTEPVALKGSTRLESQRRRRNEMREAGRKQKRVVSQAEFLARRESVERTMVVRERHRVE
DPEHPGLVTQVGVLEDDLLVEHFVTSDAQASIIGNIYLGRVQNVLPSMEAAFIDIGTGRN
GVLYASEVDWKAAGLGGRSRRIEQALKSGDQVLVQVSKDPMGHKGARLTTQISLAGRYLV
YVPGGRSAGISRKLPAPERKRLKDILGRVIPGQGGAIIRTAAENVPEEAIGADVDRLHAL
WEDVQRRAEKEKASKGAQPVTLYEEPDMLIKVVRDLFNEDFTHLVVDGKRSWNTVSAYVK
SVAPDLVDRLVRYDRRDHDDQDAFAHYRIDEQLEKALHRKVWLPSGGSLVIDRTEAMTVV
DVNTGKFTGSGGNLEETVTRNNLEAAEEIVRQMRLRDLGGMIVVDFIDMVLPENQDLVLR
RLKEALGRDRTRHQVSEVTSLGLVQMTRKRLGTGLLETFSTDCEHCGGRGLILHEDPVEH
HEHDHGGRHNRGKGSRSQSKREERKEQTKKTAPKREERETGKHAGTDAETFEQIAAAVVS
GGEQAEDTEREERSGKSSSRRRGGRGRGRGRGRSGDDRQRQDHDAQTPQEDTLSEVDAIV
SAAIDAATQADPEEPSDADYVAETSGTGEKTFQQAVAEFEASPRRRRRTRGNSRSDHRPK
RQDFQDTPREDTRRSEQKQEQRQEPAPEKQVAQKQAPQKAAVQASPGRRGRRRAVRKSVV
PQQQEQPTKQKETGGAERPAQAPAAAKQSGGGRGRRRATRRRSSGSGRQ
NT seq 3210 nt   +upstreamnt  +downstreamnt
gtggcgacgaacgacaccactgacgcacacgacgacaacgacaaggaatcgacgccgacg
ccgaagcgccgcgcaacccgcaagaccacccgcaaaacggtgaagaagaccgccccggcg
gccaaaaagaccacgaagaaaaccaccaagaaaagcgtgaagaagacggcgaagaaaacc
gccgcgcccgcccagcccaccacctccccggccgagtcggcgactagcctcgaccgcgcc
gccctcgccgagaagacccgggtgcacgccctggccaagcagctgggcatgacctccaag
gagctcatcgtcgccctcgacgccgtgggcttggtcaaggtcgcgcagtcggcgctctcc
cgcgaggaggccggccgcgtcctcgatcacctggcgggcgtcgaccccaccccgcccgcc
gcggaaccggagcaggccccggccgctcaggaagacaccgccgaacccgcggagcaagcg
gagccggaacaaaaaatccgcacccgcgtgcgcaagaacgtcgaaaacgaaatccaccag
atcgaagccaaggtcgacgccgacctcgccgacgccgtcgaggacgcccacagcgacgaa
cccctcgaagacgtcacccccgagatcaccccggcgccggaagacaagcccgccgccgcg
gcctacgccccgctcttcgtggccccggcggcagacacgcccacccgctccaaggaccgc
gacgaccaagacgaagacgacgcgaccccggcgaagcgttcgccggcgagctcacgccgc
cgcgcccgccgcagcacccgggccgccgccccggcggagacgaccgcacaaaccgagccc
actgagcccgccgcgcccgccgaccaggtcgacgagacccggcaagaggaagaagcggac
ctgccgaccgaacccgtcgcactgaagggctcgacccgtctggagtcgcagcgacgccgc
cgcaacgaaatgcgcgaggccggccgcaagcagaagcgcgtcgtctcccaggcggaattc
ctcgcgcgccgggaatccgtcgagcgcaccatggtcgtgcgcgaacgtcaccgggtggag
gacccggagcacccgggcctggttacccaggtcggggtgctggaggacgacctgctcgtc
gagcacttcgtcacctcggacgcgcaggcgtcgatcatcggcaacatctacctcggccgg
gtgcagaacgtgctgccgagcatggaggccgcgttcatcgacatcggcaccggccgcaac
ggcgtgctctacgccagcgaagtggactggaaagccgcgggcctgggcggtcgcagccgt
cgcatcgagcaggcgctgaagtccggcgaccaggtgctggtgcaggtgtccaaggacccg
atggggcacaagggcgcccgcctgaccacccagatctctttggccggccgctacctcgtc
tacgtgccgggcggaaggtccgcgggcatctcccgcaagctgcccgcccccgagcgcaag
cgcctcaaggacatcttgggccgcgtcatcccggggcagggcggggcgatcatccgcacc
gccgcggagaacgtgcccgaggaggccatcggcgccgacgtcgaccgcctgcacgcgctg
tgggaggacgtacagcgtcgcgcggagaaggagaaggcgtccaagggcgcccagccggtc
accctgtacgaggagccggacatgttgatcaaggtcgtgcgcgatctgttcaacgaagac
ttcacccacttggtcgtcgacggcaagcgttcctggaacacggtgtcggcctacgtgaag
tcggtggccccggacctggtggaccgcctcgtgcgctatgaccgtcgcgaccacgacgac
caggacgccttcgcccactaccggatcgacgagcagctggaaaaggccctgcaccgcaag
gtgtggctgccgtccggcggctcgctggtcatcgaccgcaccgaggcgatgaccgtcgtc
gacgtcaacaccggcaagttcaccggctcgggcggcaacctcgaagagaccgtcacccgc
aacaacctcgaggcggccgaggagatcgtccgccagatgcggttgcgcgatctgggcggc
atgatcgtcgtcgacttcatcgacatggtcctgccggaaaaccaggacctcgtcctgcgc
cgcctcaaggaggcgctcggccgcgaccgcacccgccaccaggtctccgaggtcacttcc
ctcgggctggtgcagatgacgcgtaagcgcctgggcaccggactgctggaaaccttctcc
accgactgcgagcactgcggcggacgaggactgatcctgcacgaggacccggtcgagcac
cacgagcacgaccacgggggacgtcacaaccggggcaagggctctcgttcgcagtccaag
cgcgaagagcggaaagagcagacgaaaaagaccgcacccaagcgcgaggaacgggaaacc
ggcaaacacgcgggcacagacgcggaaaccttcgagcagatcgccgcagccgtggtctcc
ggtggcgagcaggcggaagacaccgagcgggaagaacgctccggcaagtcctcctcgcgt
cgccgtggcggacgcggccgcggtcgcggccggggtcgttccggcgatgaccgccaacgg
caggaccacgacgcgcaaacgccgcaggaggacacgctgagcgaggtcgacgccatcgtc
tctgctgcgatcgacgccgcgacccaagctgatcccgaagaaccgtcggacgccgattac
gtcgccgagaccagcggaacgggagagaagacgttccagcaggcggtcgccgagtttgag
gcctccccgcgccggcgtcgccgcacccgcggcaactcgcgctccgatcaccgccccaag
cggcaagactttcaggacacgccccgcgaggacacccgccgatcggagcagaagcaggaa
cagcggcaggagccggcgccggaaaagcaggtcgcgcagaagcaggccccgcagaaggcc
gcggtccaggcctcgccgggccggcggggccgccgacgcgcggtgcgcaagagcgtcgtg
ccgcagcagcaggagcagccgacgaagcagaaggagacgggcggggccgagcgtcccgct
caggccccggccgctgcgaagcaatcgggcggcgggcgcggacgccgacgcgcgacccgc
aggcgctcgtcgggttcagggcgccagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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