KEGG T00175: CMP170C

Cyanidioschyzon merolae: CMP170C

Entry

CMP170C CDS T00175

Definition

similar to formamidopyrimidine-DNA glycosylase

Orthology

K10563

formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]

Organism

cme Cyanidioschyzon merolae

Pathway

cme03410

Base excision repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:cme03410]

SSDB

Motif

Pfam:

H2TH Fapy_DNA_glyco GYR

AA seq 260 aa
MPELPAVERARRMIDALCKSYRRINVQSAPDPKHASEFVDKLFEGRLGLDLLERRVCVGH
VLRQLGRHGKNLWFEFDEPPHVFVRFRMAGSFVVRGHEDGYVYETFRRRTAACRFHDSGT
PLVSVWPPKHTHIVFSFAPCSPGVDSASINGISVREFALVDPRKVTRMRLSDSSCPSVEI
RSLIGGFDALHALPPIERFERKMLVYPKANIKSLLLGQRFIAGLDNWMVDEVLYYAHIHP
ESRTCDLTRIDVAALHQSIA

NT seq 780 nt +upstreamnt +downstreamnt
atgccagagctgccagcagttgagcgggctcgtcgtatgatcgatgccttatgtaagagc
tatagacggataaacgttcaatccgcacccgatccgaaacatgcctctgagtttgtggac
aagcttttcgaaggcaggctggggctggacctgctcgagcgacgtgtctgcgtaggtcat
gtgctgcggcaacttggccgtcacggcaagaacctgtggtttgagttcgacgaacctccc
cacgttttcgtccgctttcgaatggctggctctttcgtggttcgtggtcacgaagacggc
tacgtttatgagacttttcgccgacgtactgccgcctgtcggttccacgactcaggaacg
cccctcgtctcagtctggccaccgaagcatacacacattgtttttagttttgctccctgc
tccccaggagtagattctgccagtataaacggtatctctgtccgagagttcgcgctggtc
gacccgcgaaaggttacgaggatgcgcctcagcgactcgtcgtgtccttctgtcgagatt
cgaagcctcataggaggcttcgatgcgctgcatgcgctccctcctattgagcgcttcgaa
aggaaaatgttagtgtacccgaaagcgaatatcaaatcgttgcttttgggccagcgcttc
atcgctgggctcgacaattggatggtcgacgaagttctttattacgctcatattcacccg
gagagtcgcacttgtgacctcactcgtatcgatgttgcagcattgcatcagagcatcgca

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (9)   

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