KEGG   Cyanidioschyzon merolae: CYME_CMI176C
Entry
CYME_CMI176C      CDS       T00175                                 
Name
(RefSeq) DNA polymerase alpha, catalytic subunit
  KO
K02320  DNA polymerase alpha subunit A [EC:2.7.7.7]
Organism
cme  Cyanidioschyzon merolae
Pathway
cme03030  DNA replication
Brite
KEGG Orthology (KO) [BR:cme00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CYME_CMI176C
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cme03032]
    CYME_CMI176C
Enzymes [BR:cme01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CYME_CMI176C
DNA replication proteins [BR:cme03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase alpha / primase complex
    CYME_CMI176C
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 zf-DNA_Pol DNA_pol_alpha_N
Other DBs
NCBI-GeneID: 16993724
NCBI-ProteinID: XP_005536340
UniProt: M1V7S7
Position
9:486914..491497
AA seq 1527 aa
MPRASRGANGKAAEALRRLAEARESGRRPSEDYELEEPERVYEAVDEDTYRSRRAEERHQ
VRSFIVKDRATFSGSSEDEDCLTYSEEESEGRTSARSRVRAGRQRSRERGSSATVARNLL
KPTQTRFLGQPTVPGTLKIEQAALATSVASHGRVQSASSSGRRKSLVDELLAEQDEWAAG
EERTFVASRARGNDSRPLDAQPNQHPTSGVISAPRRRRGAQDLLVESGPQIPLESRSDTD
HDHEHDPRTPSTQEKSWTTLQAANASDSENDMEVNDVDADLLLDRVLELEAEYAHEATEN
GVTAVEGDLPGDRVPALTFFALDMQEILDKVFVFGRALLPETSSSTAVCVQVCGIEREIF
FLPRMYVDCPDDEQATPRPYPILASEQEPRLAPISEGIAFSCVYEEVKSVLLARGITEFT
ARREERCFLTNQIDRRRAEVTSCLRVRYPAKYRALETALEGQTFSQIVGSRNSPLENFIL
ERCVPGPCWVQVSNASRVTGISSCRWSLNVDSPAQFRVLAAEEIPASQPPGLRVLTFSLR
TIAEASPTSFEIAIICATVFDNVPTNRNLGETPHPSMQFGIVRPPAHEAFPFGFERMISG
RRILRERNELAMIERFLREINQLDPDVIICHQLLTSQFDVFLKRMRELRLRDWWQLGRLV
QRRPLQDFRSHMQASGRGLNPALARQIFAGRLLCDTEEAAREYLHKEKDYGLRVLCRALL
GSYKSAATGSDGEWSAQAMRSVYREAKHLVGAIDSCLEDAKLSFLLADRLAVIPLTNELA
SICGYPWGKTMLGNRAERIEYLLLHEIHRSGKYVAPDRSSGQRASIRPKRPSFDPTAQAS
ADKRLDAARTPSSTQRGASTPTTTEGSALELASSAKRRKPAYQGGYVLEPKRGLYGTCVL
QLDFSSLYPSIIQEYNIDFTTVTLDSEGNALLPKHSNELGILPTVLRRLVQRRRQVREAA
RNESSPVRQQQLHTRQLALKLTANALYGCLGYVHSRFHIRELAELITRTGRETLERTVEL
AEQVLLRKLDDLVAASNVPDRASGVQPRVIYGDTDSIFIDSGIPFSSDSVQRIMELGHAI
RREVNKQYHTLEIEIEALYVRMLLLNKKKYAALKYQIDTGSFSKEVKGIEVVRHDWCALV
AAAGNFALDQILDPTCVATEAKDRICKYLSELATRMRQGRVDLDQFVITKQLTHDPDAYD
DAAIQPHVQVALRRRERGYVVAAGTFIQYVVCREPCDTRLRRGEAIDGARAPIDTVARRA
CHPDEYREAQGMLHLDIDWYLENQLHAVLRRITESVPGLDAAALACCLGLNAQPFLRARI
MADQMTPGSTASSQDQRRKLLVEDLFGALSDPLVVPFTAQCPACDQRFPIDFRFEGEHIR
PAIHIDRCPRPACGAVIPVTVLKQQLIVFIRHVIRRYYTSPELLRGHACRAADDDWLAHQ
DSDVTSFPLSSESLLQEGISEREYGERTLYAQLERLQLALGKNSDDPDAEKPSGGSASTA
AVALQALVQSYLDACAYQYVELRALFS
NT seq 4584 nt   +upstreamnt  +downstreamnt
atgccaagagccagtcgaggtgcaaacggcaaagcagctgaagcgctgcggaggcttgct
gaagctcgtgaaagcggtaggcgaccaagtgaggactatgagctcgaagaacctgagcgg
gtatacgaggcggtggacgaggacacgtatcgatcgcgtcgggcggaagaacgccaccag
gtacgaagcttcattgtcaaggaccgggcaacgttctcgggcagctccgaggacgaagac
tgcttgacgtattcagaggaggagagtgaagggcgaacaagcgctcgatcacgtgtgcgc
gcgggacgacagcgaagcagggagcgaggctcgagtgctacagtggcgcggaacctgctc
aaaccgactcaaactcgtttcctggggcagcctacagtaccggggacgctcaaaattgag
caagccgctctggctacttccgttgcgtcacatgggcgtgtgcagtcagcctcaagctct
ggtcgacgcaaaagcttggttgacgaactgctcgctgagcaagatgaatgggcagcgggc
gaggaacgcacgtttgtcgcctcgagagcgcgcggaaacgatagtcgcccgctagatgca
cagccaaatcagcatccgacatcgggtgtgatatcggcaccacgacggcgacgtggcgcc
caagatctgctcgtggagagtggcccgcagatcccactcgaaagccgttcagatacggat
cacgatcacgagcatgatccgagaacacccagtacccaagaaaaatcttggacgactctc
caggctgcaaatgcgagcgattctgaaaatgacatggaggtgaacgacgtcgacgccgac
ctcctcctggatcgcgtacttgaactcgaggccgaatacgcccacgaggcaactgaaaac
ggagtaactgccgtagaaggcgatcttcctggtgatcgcgttcccgcgctaacctttttc
gcgctcgacatgcaggaaattttggacaaagtcttcgtgttcggtcgagctctgttgccg
gaaacaagctcttcaactgcggtttgtgttcaagtttgcggcattgaaagggaaatcttc
ttcttgcctcgaatgtacgtagactgccccgacgacgagcaggcaacaccacgtccctac
ccgatccttgcgtccgagcaggagccaagattggcccccatctcagaaggcattgctttc
tcctgtgtctacgaggaagtcaagtcagttttgctggctcgcggcatcaccgaattcacc
gcccgtcgcgaggaacgttgtttccttacgaaccagatcgatcgtcgccgggcggaagta
acatcgtgtttgcgtgtgcgatacccggcaaagtatcgagctttggaaactgctctcgag
ggccagactttctcccaaatcgttggttcaagaaattcaccgctagagaatttcatactt
gagcgatgcgtgccaggtccgtgttgggtacaagtctcgaacgcaagccgcgtcactggg
atatcatcatgtcgttggagccttaacgtggactcgccagctcagttcagagtgctcgcg
gcggaggagattccagcgtcgcaaccgccagggctgcgcgtactgacgttttccttgcgc
acgatcgctgaggcatctcctacatcgttcgaaatagcgataatctgcgcgactgtattc
gataatgtgcccacgaaccggaacttgggcgaaacgccgcacccttccatgcagtttggc
atcgttcggccgccagcgcatgaggcattccctttcggtttcgagcgaatgatttcggga
agaagaattcttcgcgagcggaacgagctcgccatgatcgagcgctttctccgcgaaatc
aatcagctagatccagatgtcatcatttgccaccagctcctcacgagccaattcgatgtg
ttcttgaaaagaatgcgtgagctgcgtctccgtgactggtggcagctcggccggcttgtt
cagcgacgtcctttgcaagattttcgaagtcatatgcaagcatctggtcgcggtttgaat
cctgcactggctcggcaaattttcgccgggcggctcttatgcgacacagaggaggcggct
cgagagtacttgcacaaggagaaggactatgggctccgtgtcctctgccgggcgctcctc
ggctcctacaaaagcgccgcgacgggtagcgatggtgaatggtcagcccaagccatgcgt
tcagtttatcgcgaggcgaagcatctcgtgggggccatcgactcatgtctggaagacgcc
aagctcagcttcctcttggcagaccgactggcggtcattccgcttacgaatgagctcgcc
agcatatgtggatacccttggggtaagacgatgcttggaaatcgagctgagcgcattgag
tatctgctgctgcacgagatccaccgttctggcaagtacgttgcgcctgatcggagttcg
ggccaaagagccagcatccgaccgaaacgcccaagcttcgacccgacagcgcaggcaagc
gccgacaaaaggctggacgctgcgagaactccctccagtacacagagaggtgcctcaaca
ccgaccacaactgagggcagcgcactcgagcttgcgtcttcagccaaacggcgcaaacct
gcctaccaagggggatatgtgctcgagccaaagcgcggtctttacgggacttgcgttctg
caactcgactttagctccctctacccgtccatcattcaggaatacaacatagactttacc
accgtcacattggactctgagggaaacgccctcttgcccaaacatagcaacgagctgggc
attcttccaaccgtgcttcggaggctcgttcagcgacgaagacaggttcgagaagcggct
cgcaacgagtcgagccctgtccgccagcaacagctgcacaccaggcagctagcgctcaaa
ctgacagcgaacgccctgtatggttgtttgggatacgtccactcgcgtttccacattcgc
gaacttgcggaactgatcacacgaactggacgggaaacgcttgagcgtacagtagagctc
gcggaacaagttttgcttcgaaagctcgacgacctggttgcagcgtcaaacgtaccggat
cgtgcttctggggtccagcctcgcgttatctacggcgatacggactcgatcttcatcgac
agcgggattcctttttcctctgattccgtgcagcgtatcatggagctgggccatgctatt
cgccgcgaggttaataagcagtaccatactttggaaattgaaatcgaagcgttgtatgtg
cgtatgttattactgaacaagaagaaatatgccgcgctcaagtaccagatcgataccggc
tcattcagcaaggaggtcaaaggcatcgaagtcgttcgacacgactggtgcgcgctcgtc
gccgcagcgggcaactttgccctggatcagattttggacccaacctgtgtggccacggaa
gcgaaagaccgcatttgcaagtacttgtcggagctggcgacgcgcatgcggcaaggacgc
gtcgacctagatcagttcgttatcaccaaacagctgacccatgacccggatgcctacgat
gatgcagcgatccagccgcatgtgcaggtcgccctgcgtcggcgagaacgtggatacgtc
gtcgcagctggcacctttatccagtacgttgtgtgccgggagccgtgcgatactcggctt
cgacgaggagaggcaatcgatggtgctcgcgcacccatcgataccgttgcacgtcgggcg
tgccatccggatgagtaccgcgaagcacagggcatgctgcatctcgatatcgactggtat
ttagagaatcagttgcatgcggtgctgaggcgtataacggagtctgttccaggccttgat
gccgctgcactggcgtgctgtcttggtctgaacgcccaaccgttcctgcgagctcgaatc
atggccgaccagatgacacccggaagcaccgcgtcgagtcaagaccaacgtcgcaagctt
cttgtcgaggatctttttggtgcgttgtccgatccgctcgtggtgccgttcacagcccag
tgtcccgcttgtgatcagcggtttcccatcgatttccgcttcgaaggcgaacacatcaga
ccggccattcatattgatcgttgcccacgaccagcttgcggtgccgtcatcccagtcacc
gtgcttaagcagcagttaatcgtgttcattcgccacgtgatccgtcggtactacacgagt
cccgaactgttgagaggccatgcttgtcgagccgccgacgacgactggctcgcgcaccaa
gactcggatgttacgtcgttcccgttgtcaagtgaatcgcttctccaggagggaatctct
gaacgcgaatatggcgaacgcacgctctatgcgcaattggagcgattacaacttgccttg
ggcaaaaattccgacgatccagatgcggagaagccgtccgggggttcagcatccacagct
gctgtggcgttgcaagcccttgttcagtcgtatctagatgcatgcgcgtaccagtacgtt
gagctcagagccttgttctcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (48)   

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