KEGG T03862: VO01

Clavibacter michiganensis subsp. insidiosus: VO01_00030

Entry

VO01_00030        CDS       T03862

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

cmh Clavibacter michiganensis subsp. insidiosus

Brite

KEGG Orthology (KO) [BR:cmh00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cmh03032]
    VO01_00030
   03400 DNA repair and recombination proteins [BR:cmh03400]
    VO01_00030
Enzymes [BR:cmh01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     VO01_00030
DNA replication proteins [BR:cmh03032]
Prokaryotic type
  DNA Topoisomerases
   VO01_00030
DNA repair and recombination proteins [BR:cmh03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      VO01_00030

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3

Other DBs

NCBI-ProteinID:

AJW80311

UniProt:

A0A0D5CKY5

Position

6023..8011

AA seq 662 aa
MEETHNDSDHITRQQVSNDYGANEIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVSEIVDN
SVDEALAGFASDIQITMRKDGGIRVVDDGRGIPVDIHPVEGISTVELVLTKLHAGGKFGG
GGYAVSGGLHGVGSSVVNALSERLDVEVRRQGAVWRQSFTIGVPDAPLQKGEGSTETGTT
ITFWPSREIFETVEFDYDTLRARFQQMAFLNKGLALTLHDERGVDGAEHRTEKFLYERGL
VDYVEHLVKAKKTEVVNADVIAFESEDTVKKISLEVAMQWTTSYTESVHTYANTINTHEG
GTHEEGFRAALTTLVNRYARENKLLREKDENLTGDDVREGLTAVISVKLGEPQFEGQTKT
KLGNTEAKAYVQRIVGQQLGDWLEKNPAQAKDIIRKGMQASQARLAARKAREQTRRKGLL
ESGGMPGKLKDCQSKDPALSEVFLVEGDSAGGSAVQGRNPTTQAILPLRGKILNVEKARL
DRALQNNEVQSMITAFGAGIGEDFNAEKVRYHKIVLMADADVDGQHITTLLLTLLFRYMR
PLIELGYVYLAQPPLYRLKWSNADHQYVYTDAERDALLAHGQANGKRIPKDNGIQRYKGL
GEMDYKELWETTMDPATRTLMQVTLDDAAGADEVFSTLMGEDVESRRSFIQRNAKDVRFL
DI

NT seq 1989 nt +upstreamnt +downstreamnt
atcgaggagacgcacaacgactccgaccacatcacccgccagcaggtgagcaacgactac
ggcgccaacgagatccaggtgctcgagggcctcgaggccgtgcgcaagcgacccggcatg
tacatcgggtcgaccggcccgcgcggcctgcaccacctggtgagcgagatcgtcgacaac
tccgtcgacgaggccctcgccgggttcgccagcgacatccagatcacgatgcggaaggac
ggcggcatccgcgtcgtcgacgacggccgcggcatcccggtcgacatccacccggtcgag
ggcatctccacggtcgagctcgtcctcaccaagctgcacgccggcggcaagttcggcggc
ggcggctacgcggtgtccggcggcctgcacggcgtcggcagctccgtcgtgaacgcgctg
tcggagcgcctcgacgtcgaggtccgccgtcagggcgccgtctggcgacagagcttcacc
atcggcgtgccggacgcgccgctgcagaagggcgagggctccacggagaccgggacgacg
atcaccttctggccgagccgggagatcttcgagaccgtcgagttcgactacgacaccctg
cgcgcgcggttccagcagatggcgttcctcaacaagggcctggccctcacgctgcacgat
gagcgcggcgtggacggcgcggagcaccgcaccgagaagttcctctatgagcgcggcctc
gtcgactacgtcgagcacctcgtgaaggcgaagaagaccgaggtcgtcaacgccgacgtc
atcgccttcgagtccgaggacacggtcaagaagatcagcctcgaggtcgcgatgcagtgg
accacctcctacacggagagcgtgcacacgtacgcgaacaccatcaatacgcacgagggc
ggcacccacgaggagggcttccgcgcggcgctcaccacgctggtgaaccgctacgcgcgc
gagaacaagctgctccgcgagaaggacgagaatctcacgggcgacgacgtgcgcgagggc
ctcaccgccgtcatctccgtgaagctcggcgagccgcagttcgagggccagaccaagacc
aagctcggcaacaccgaggcgaaggcctacgtgcagcgcatcgtcggccagcagctcggc
gactggctcgagaagaacccggcgcaggcgaaggacatcatccgcaaggggatgcaggcg
tcgcaggcgcggctggccgcccgcaaggcgcgcgagcagacccggcgcaagggcctgctc
gagtcgggcggcatgcccggcaagctcaaggactgccagagcaaggacccggcgctcagc
gaggtgttcctcgtcgagggcgactcggccggcggatccgcggtgcaggggcgcaacccc
acgacgcaggcgatcctgccgctgcggggcaagatcctcaacgtggagaaggcccgtctc
gaccgcgcgctgcagaacaacgaggtgcagtcgatgatcaccgcgttcggcgcgggcatc
ggcgaggacttcaacgccgagaaggtcaggtaccacaagatcgtgctgatggccgacgcg
gacgtcgacggccagcacatcacgaccctgctgctcaccctgctgttccggtacatgcgg
ccgctcatcgagctcggctacgtgtacctcgcgcagcccccgctgtaccggctcaagtgg
tcgaacgccgaccaccagtacgtctacacggacgccgagcgcgacgccctcctggcgcac
gggcaggccaacggcaagcgcatccccaaggacaacggcatccagcgctacaagggcctc
ggcgagatggactacaaggagctgtgggagaccacgatggatccggccacccgcacgctc
atgcaggtgacgctcgacgacgccgcgggcgctgacgaggtcttctcgacgctgatgggc
gaggacgtcgagtcccgccgcagcttcatccagcgcaacgccaaggacgtcaggttcctc
gacatctga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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