KEGG T03862: VO01

Clavibacter michiganensis subsp. insidiosus: VO01_07400

Entry

VO01_07400        CDS       T03862

Name

(GenBank) DNA topoisomerase IV subunit A

K02469

DNA gyrase subunit A [EC:5.6.2.2]

Organism

cmh Clavibacter michiganensis subsp. insidiosus

Brite

KEGG Orthology (KO) [BR:cmh00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cmh03032]
    VO01_07400
   03400 DNA repair and recombination proteins [BR:cmh03400]
    VO01_07400
Enzymes [BR:cmh01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     VO01_07400
DNA replication proteins [BR:cmh03032]
Prokaryotic type
  DNA Topoisomerases
   VO01_07400
DNA repair and recombination proteins [BR:cmh03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      VO01_07400

SSDB

Motif

Pfam:

DNA_topoisoIV DNA_gyraseA_C Inp1

Other DBs

NCBI-ProteinID:

AJW78979

UniProt:

A0A0D5CI62

Position

complement(1548309..1550855)

AA seq 848 aa
MSPSTTNTTPDEPAERIEDVDVSTEMENSFLEYAYSVIYSRALPDARDGLKPVQRRILYQ
MSEMGLRPDRGHVKSARVTGEVMGKLHPHGDSAIYDAMVRMAQPFTLRVPLIDGHGNFGS
LDDGPAAPRYTEARLAASALAMVEGLDEDVVDFVPNYDNAFMQPAVLPAALPNLLVNGAS
GIAVGMATNMVPHNLIEVVGAARHLIDHPDATLDDLMAFVPGPDLPTGGTIIGLSGVKDA
YLTGRGSFKTRARVSVESLTPRKSGLVVTELPYLVGPEKVIEKIKDGVQNKKLSGITDVT
DLTDRTHGLRLVIEIKTGFNPEAVLEQLYRYTPLEDGFSINNVALVDGSPQTLGLKELLQ
VYVAHRLDVVTRRTRYRLARRQERLHLVLGLLIAILDIDEVIQVIRGSDDTEQARARLMD
VFDLSTLQADYILELRLRRLTRFSRIELEEERDRLQAEIAELEAILADPRRLRALVSTEL
QEVADRFGTPRRTLLTEAAPSVAGAASRRSAPVLEIADIPCRVLLSTTGRAVRVDLLADA
PGTPLQTVRRSSHDAVLTAIETTSRTRIGAITNTGRLITMTPVDLPVVPVASVQLGAGVR
IRDYLGLTDKKERVVALVALGTEEAIALGTRQGVVKRIAPSALPAKPEFEVIALKKGDEV
VGARQGAETDELVFVTSEAQLLHFPAVSVRPQGIQAGGVAGVNLGAGARVLFFSSVAPEG
AQVVTVSASSATIAGVDPGRAKVSAFGDFPRKGRATGGVRAHAYLKGEDHLALAWVGPGP
ALAVGPAGEVRQLPPTGMKRDGSGIPLEKAIGSVGQAVTPAEAPDAASGAAAGVVEPSAE
DGSAPLET

NT seq 2547 nt +upstreamnt +downstreamnt
atgagtccctccaccacgaacaccacgcccgacgagcccgccgagcggatcgaggacgtc
gacgtctccaccgagatggagaactcgttcctcgagtacgcgtactcggtcatctactcc
cgggccctgcccgacgcgcgcgacgggctcaagcccgtgcagcgccgcatcctctaccag
atgagcgagatgggcctccgtcccgaccgcgggcacgtgaagtccgcccgcgtcacgggc
gaggtgatgggcaagctccacccgcacggcgactccgccatctacgacgcgatggtgcgc
atggcgcagccgttcacgctgcgggtgccgctcatcgacgggcacggcaacttcgggtcg
ctcgacgacggacccgcggcgccccggtacacggaggcccggctcgccgcctccgcgctc
gcgatggtcgagggcctcgacgaggacgtcgtcgacttcgtcccgaactacgacaacgcg
ttcatgcagccggccgtgctcccggcggcgctcccgaacctgctggtcaacggcgcgagc
ggcatcgcggtcggcatggcgacgaacatggtgccgcacaacctcatcgaggtcgtgggc
gccgcgcgtcacctcatcgaccacccggacgccacgctcgacgacctcatggcgttcgtg
ccggggccggatctccccacgggcggcacgatcatcgggctgtcgggcgtcaaggacgcg
tacctcaccggccgcggcagcttcaagacccgcgcgcgcgtctccgtcgagagcctcacg
ccgcggaagtcggggctcgtcgtcaccgagctgccgtacctcgtcggccccgagaaggtc
atcgagaagatcaaggacggcgtccagaacaagaagctgtcgggcatcaccgacgtcacc
gacctcaccgaccgcacgcacgggctgcggctcgtcatcgagatcaagacgggcttcaat
ccggaggcggtgctcgagcagctctaccgctacacgccgctggaggacggcttcagcatc
aacaacgtcgcgctcgtcgacggcagcccgcagacgctggggctgaaggagctgctgcag
gtctacgtggcgcaccgcctcgacgtcgtcacgcggcgcacgcgctatcggctcgcccgc
cggcaggagcggctgcacctcgtgctcggcctcctcatcgcgatcctggacatcgacgag
gtgatccaggtcatccgcggcagcgacgacaccgagcaggcgcgcgcgcggctcatggac
gtgttcgacctgtcgacgctgcaggccgactacatcctggagctccgcctgcgtcggctc
acgcggttcagccgcatcgagctggaggaggagcgcgaccggctgcaggccgagatcgcc
gagctcgaggcgatcctcgccgatccccgccggctccgcgccctcgtctcgaccgagctg
caggaggtcgccgaccgcttcggcacgccgcgccgcacgctcctcaccgaggcggcgccg
agcgtcgccggggcggcgagccgccggtcggcgcccgtgctcgagatcgccgacatcccg
tgccgggtgctgctgtcgaccacgggccgcgcggtccgcgtcgacctgctggccgatgcg
ccgggaacgcccctgcagaccgtccgccgcagctcccatgacgcggtcctcaccgcgatc
gagaccacgagccgcacgcgcatcggggcgatcacgaacaccggccggctcatcaccatg
acccccgtcgacctccccgtggtcccggtcgcgagcgtgcagctcggcgccggcgtgcgg
atccgcgactacctcggcctcacggacaagaaggagcgcgtcgtcgcgctcgtggcgctc
ggcacggaggaggcgatcgccctgggcacgcgccagggcgtcgtcaagcgcatcgccccg
tccgccctgcccgcgaagcccgagttcgaggtcatcgcgctgaagaagggcgacgaggtc
gtcggcgcgcgtcagggcgcggagacggacgagctcgtcttcgtcacgagcgaggcgcag
ctgctgcacttccccgcggtgtcggtgcggccgcagggcatccaggcgggcggcgtcgcc
ggcgtcaacctcggagccggcgcacgcgtgctgttcttctcctccgtcgcccccgagggc
gcccaggtcgtgacggtctcggcgtcgtccgccaccatcgcgggcgtggatcccggccgg
gcgaaggtcagcgccttcggcgacttcccgcgcaagggccgcgccacgggcggcgtccgc
gcgcacgcgtacctcaagggcgaggaccacctcgccctcgcctgggtcggccccgggccc
gctctcgcggtgggtccggccggcgaggtgcggcagctcccgcccaccggcatgaagcgc
gacgggtcgggcataccgctcgagaaggcgatcgggagcgtcggccaggcggtcaccccc
gccgaggcgccggatgccgcgtccggcgcggccgcgggcgtcgtcgagccgtcggccgag
gacggctccgcgccgctcgagacgtag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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