KEGG   Clavibacter michiganensis subsp. insidiosus: VO01_11625
Entry
VO01_11625        CDS       T03862                                 
Name
(GenBank) DNA polymerase III subunit delta'
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
cmh  Clavibacter michiganensis subsp. insidiosus
Pathway
cmh03030  DNA replication
cmh03430  Mismatch repair
cmh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cmh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VO01_11625
   03430 Mismatch repair
    VO01_11625
   03440 Homologous recombination
    VO01_11625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cmh03032]
    VO01_11625
   03400 DNA repair and recombination proteins [BR:cmh03400]
    VO01_11625
Enzymes [BR:cmh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VO01_11625
DNA replication proteins [BR:cmh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     VO01_11625
DNA repair and recombination proteins [BR:cmh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     VO01_11625
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA AAA_11 AAA_16 Mg_chelatase nSTAND3 AAA_29 RNA_helicase AAA_5 RBD-FIP
Other DBs
NCBI-ProteinID: AJW80550
UniProt: A0A0D5CMR9
Position
complement(2456047..2457216)
AA seq 389 aa
MWDELTGQSEAVALLAAASSPRATARDAAGTALAHSWLITGPPGSGRSNLAYAFATALLS
DGTPEGDAATARQVAARSHPDLGVLATERVIIAIDEVRALVTSSQYSPSVGRYRVMVVED
ADRMTERTSNLLLKALEEPPERTIWILCAPSEADLIPTIRSRVRSVRLRIPSVEDVAVLI
QRRDGVDAATATRAAREAQSHIGMAHRLATDAEARERRRRTLELALGIRSVGDAVRAAAA
MLELAGQDAKAFTVQRDADERERALRSLGVQDGGSIPPQLRAQIRQLEEDQKRRATRSLR
DGIDRILVDLMSLHRDVLLHQLGADLPQVNEAIAPRIAEAAGAGSAAASLAVLDAVGVAR
RRIDANVSPALALEAMLVSITRTRPSGRA
NT seq 1170 nt   +upstreamnt  +downstreamnt
atctgggacgagctcacgggccagtcagaggccgtcgccctgctcgccgccgccagcagc
ccccgggccaccgcgcgcgacgccgccggcaccgcgctcgcgcactcgtggctcatcacg
gggcctcccggatccggccgctcgaacctcgcctacgccttcgcgaccgcgctgctcagc
gacggcacgccggagggagatgcggctacggcccgtcaggtcgccgcccgcagccacccc
gacctcggcgtgctcgcgaccgagcgggtcatcatcgccatcgacgaggtgcgcgcgctc
gtcacgtcgtcgcagtactcgccgtcggtcggccggtaccgcgtcatggtcgtcgaggac
gccgatcggatgacggagcgcacgtccaacctgctgctgaaggcgctcgaggagccgccg
gagcgcaccatctggatcctgtgcgcgcccagcgaggccgacctgatcccgaccatccgc
tcccgcgtgcgcagcgtgcggttgcgcatcccgtcggtcgaggacgtggccgtcctgatc
cagcgtcgcgacggcgtcgacgccgccacggcgacccgcgcggcgcgcgaggcgcagagc
cacatcggcatggcgcaccggctcgccaccgacgcggaggcccgcgagcgccgcaggcgc
accctggagctcgcgctcgggatccgctcggtcggcgacgccgtgcgcgcggccgccgcg
atgctcgagctcgcgggccaggacgcgaaggccttcacggtgcagcgcgacgccgacgag
cgcgagcgcgcgctccggtcgctcggcgtgcaggacggagggtcgatcccgccgcagctg
cgcgcgcagatccggcagctcgaggaggaccagaagcggcgcgccacgcggagcctccgc
gacggcatcgaccggatcctcgtcgatctcatgtccctgcaccgcgacgtgctcctgcac
cagctgggtgcggacctgccccaggtgaacgaggcgatcgcgccccggatcgcggaggcc
gccggggccgggtccgcggcggcgtcgctcgcggtcctcgacgcggtcggggtggcgcgc
cgtcggatcgacgccaacgtgtcgccggcgctcgccttggaggccatgctcgtgtccatc
acccgcacgcgcccgtcgggtcgcgcgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (23)   

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