KEGG   Clavibacter michiganensis subsp. michiganensis: CMM_0004
Entry
CMM_0004          CDS       T00529                                 
Symbol
recF
Name
(GenBank) DNA replication and repair protein RecF
  KO
K03629  DNA replication and repair protein RecF
Organism
cmi  Clavibacter michiganensis subsp. michiganensis
Pathway
cmi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cmi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CMM_0004 (recF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmi03400]
    CMM_0004 (recF)
DNA repair and recombination proteins [BR:cmi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     CMM_0004 (recF)
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_15 AAA_21 SbcC_Walker_B AAA_29 ABC_tran
Other DBs
NCBI-ProteinID: CAN00009
UniProt: A5CLT6
Position
4045..5259
AA seq 404 aa
MIVRHLSLGDFRNYTRADVALLPGATLFVGSNGQGKTNLVEALGFLSTLGSHRVSTDQAL
IRQGAESAVIRALLQHAGRELRVEVQINRSAANRAQVNSTPTKPRELPRYFSSVLFAPED
LALVRGDPSGRRRLLDQLLVLRTPRLAGVLSDYDRALKQRNTLLKSARARGMKADQLGTL
DIWDERLVAIGSQIIAARGALVEALQPELARAYLAVAGSDHGPSARPELSILADDPGEDD
IADETGARDGGRFTRSDDVVPVFTAAIARMRPRELERGLTLVGPHRDDVLFRLNGLPAKG
YASHGESWSFALALKLASAELLRRDSQTGDPVLILDDVFAELDQARRGRLAEAVTGFEQV
LITAAVFEDVPAHLAANAVHIRAGEIVDAPAPASEPDAEGGGAA
NT seq 1215 nt   +upstreamnt  +downstreamnt
atgatcgtccgtcacctctccctgggtgacttccgcaactacacccgcgcggacgtcgcg
ctcctgcccggtgccaccctcttcgtggggagcaacgggcagggcaagacgaacctggtg
gaggcgctgggcttcctgagcacgctcgggtcgcaccgcgtctccaccgaccaggcgctc
atccgccagggtgccgaatccgccgtgatccgcgcgctgctgcagcacgcgggccgggag
ctccgggtcgaggtgcagatcaaccggtccgcggccaaccgcgcgcaggtcaacagcacg
ccgaccaagccgcgcgagctgccgcggtacttctcgagcgtcctgttcgcgccggaggac
ctggcgctcgtgcgcggggatccgtcggggcgtcgccggctgctcgaccagctgctcgtg
ctgcgcacgccgcgcctcgccggcgtgctgtcggactacgaccgggcgctgaagcagcgc
aacaccctgctgaagtcggcgcgggcgcgcgggatgaaggcggaccagctggggacgctc
gacatctgggacgagcggctcgtggcgatcggatcgcagatcatcgcagcgcgcggcgcc
ctggtcgaggcgctgcagccggagctcgcgcgcgcgtacctggcggtggcgggatccgac
cacggtccctccgcgcgtcccgagctgagcatcctcgcggacgacccgggcgaggacgac
atcgcggacgagacgggtgcgcgcgacggcggccgcttcacgcggagcgatgacgtagtg
cccgtcttcaccgcggccatcgcgcggatgcgaccacgcgagctcgagcggggcctgacc
ctggtcggcccgcaccgcgacgacgtgctgttccggctcaacgggttacccgcgaagggc
tacgccagtcacggggagtcgtggtcgttcgccctggcgctgaagctcgcgtcggccgag
ctgctgcgacgcgactcgcagacgggggatcccgtgctgatcctcgacgacgtgttcgcc
gagctcgatcaggccaggcgagggcgcctcgcggaggccgtcaccggcttcgagcaggtg
ctgatcaccgcggccgtgttcgaggacgtgcccgcgcacctggcggcgaacgccgtgcac
atccgggccggcgagatcgtggacgctccggcgcctgcctcggaacccgacgccgagggc
gggggagcggcgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (7)   
   Pfam (7)   
All databases (22)   

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