KEGG   Clavibacter michiganensis subsp. michiganensis: CMM_0090
Entry
CMM_0090          CDS       T00529                                 
Symbol
tomA
Name
(GenBank) tomatinase, endo-1,4-beta-glycosidase
  KO
K01181  endo-1,4-beta-xylanase [EC:3.2.1.8]
Organism
cmi  Clavibacter michiganensis subsp. michiganensis
Brite
KEGG Orthology (KO) [BR:cmi00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    CMM_0090 (tomA)
Enzymes [BR:cmi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.8  endo-1,4-beta-xylanase
     CMM_0090 (tomA)
SSDB
Motif
Pfam: Glyco_hydro_10 ChitinaseA_N Glyco_hydro_42 Big_3_5
Other DBs
NCBI-ProteinID: CAN00109
UniProt: A5CM25
Position
complement(132170..133801)
AA seq 543 aa
MRTLTSAALATTVALGLTLIAAVPARASTGDGPTLRELAEPAGLTIGSGSIKAAEWTKDD
RPSNYLTDPRFADTLAEQFNGLSPENEMKWAFTQPEEGVYDFAGLDRLVAFAEEHDMAVK
GHGLISSCCDPEYVTSITDAGEMRAAMTEHFTTVMERYDGRIDRWDVVSEALESQGTTLQ
STTFFKVLGPGYIADAFRIARAADPDAKLFINENLVEFDAAKRQAFLDLLTGLVAEGVPV
DGVALQMHETFAGPLPGVITEMVDSYRALGLDVEIAELDVHTYDPVSQATIYGDVVAEAL
AAGVTEISTWGFTDKHLYTWLPGAKPLIFDEEYGPKPAYFAVRDALQQFVTPTAAPGVAS
LSNTGRKSGLSDGDYDIKMNLTKGAPGSYYRLYENDVLVSSQRLDSLATPRQSATTSFSG
KAEGKYRYRAELINSQGVTSTKTTTVLVKHLAPSRPVVSVDNRDGDGTFVATATLKSGIN
ATSYAFKLDGRIVGTGPLTAATPNKQTAKVSLTGIAAGRHALTAVFTNTKGSTESRSVTV
RVR
NT seq 1632 nt   +upstreamnt  +downstreamnt
atgagaacactgacatccgcagccctcgcgaccaccgtcgctctagggctgacactgatc
gcggcagtccccgcgagggcatcgaccggcgatggacctacgctgcgtgagctggccgag
ccggccggtctcacgatcggatccggctcgatcaaggccgcggagtggacgaaggacgac
cgcccgtcgaactacctgaccgatccgcggttcgccgacaccctcgccgaacagttcaat
ggcctttctcccgagaacgagatgaaatgggccttcacgcaacccgaagagggtgtgtac
gacttcgctgggcttgaccgactggtcgccttcgccgaagagcacgacatggcggtaaag
ggccatggtctgatctccagctgctgcgatccggagtacgtgacctcgatcacggatgcc
ggcgagatgcgggcggcgatgacagagcacttcaccactgtgatggagcgttacgacgga
aggatcgatcggtgggacgttgtctctgaagcgctcgagtcgcaaggtacgacgcttcaa
agcaccaccttctttaaggtcctcggtcccgggtacatcgctgacgccttccgcatcgcg
cgagcagccgacccggacgcgaagctcttcatcaacgagaacctggtcgagttcgatgcg
gcgaagcggcaggcgttcctcgacctgctcaccgggctggtcgccgaaggcgtacccgtc
gacggagtcgcgctccagatgcacgagacgttcgccggccctctccccggagtgatcacc
gagatggtcgactcgtaccgtgcgcttggtcttgacgtcgagatcgccgagctcgatgtg
cacacctacgaccccgtctcgcaggcgaccatctacggtgacgtcgtagccgaggctctc
gcggccggcgtgacggagatcagcacttggggcttcacggacaagcacctctacacctgg
ctcccgggagccaagccactgatcttcgacgaggagtacggccccaagcccgcctacttc
gccgttcgcgacgcactccagcagttcgtcacgcccaccgctgcccccggcgtggccagc
ctctccaacacgggccgaaagtccgggctgagcgacggtgattacgacatcaagatgaac
ctcaccaagggcgcgccgggcagctactaccgcctctacgagaacgatgtcctcgtgtcc
tcgcagcgcctcgactccctcgcgaccccgcggcagtcggcgactacgtccttctccggg
aaggcggaggggaagtacaggtaccgcgcggagctcatcaactcacagggcgtcacgtcg
acgaagaccaccacggtgctggtgaagcacctcgcacccagcagaccggtggtctcggtc
gacaacagggacggagacggcaccttcgtcgccacggcgacgctgaagtcagggatcaac
gccacctcctacgccttcaagctggacggccggatcgtcgggacggggcccctgacggct
gcgacgcccaacaagcagactgcgaaggtgtccctcaccggaatcgccgctggtcggcac
gctctcaccgccgttttcaccaatacgaagggatccaccgagtcgaggtcggtcaccgtc
agggtgcgctag

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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