KEGG   Clavibacter michiganensis subsp. michiganensis: CMM_0874
Entry
CMM_0874          CDS       T00529                                 
Symbol
rnhA
Name
(GenBank) Ribonuclease H
  KO
K03469  ribonuclease HI [EC:3.1.26.4]
Organism
cmi  Clavibacter michiganensis subsp. michiganensis
Pathway
cmi03030  DNA replication
Brite
KEGG Orthology (KO) [BR:cmi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CMM_0874 (rnhA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cmi03032]
    CMM_0874 (rnhA)
Enzymes [BR:cmi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     CMM_0874 (rnhA)
DNA replication proteins [BR:cmi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RNase H
    CMM_0874 (rnhA)
 Prokaryotic type
   Elongation factors (bacterial)
    RNase H
     CMM_0874 (rnhA)
   Elongation factors (archaeal)
     CMM_0874 (rnhA)
SSDB
Motif
Pfam: RNase_H RHH_1 CopG_antitoxin DUF6364
Other DBs
NCBI-ProteinID: CAN00911
UniProt: A5CPA8
Position
complement(996801..997559)
AA seq 252 aa
MTITAAADGSALGNPGPAGWAWYVDDEHWAAGGWAHATNNQGELKAVLELFRATAHLDDD
LLVLCDSQYVINSVTKWMPGWKRKGWRKGDGKPVLNVELLKEIDAEIQGRRYRFEWVKGH
ANHPLNEAADVRARAVATAFQGRSAIPAGPGWAGHDADEGAASPDDTTETAAVAADAERA
ADPVTAAAEELEAEAPAQPGLFDFDAFDEEIAPEPGDTTLTIALDRDTMARLSAHARERG
VSVDEAVRELLP
NT seq 759 nt   +upstreamnt  +downstreamnt
gtgacgatcaccgccgcggcagacggatccgcgctcggcaaccccggacccgccggctgg
gcctggtacgtcgacgacgagcactgggccgcgggcggatgggcgcacgcgaccaacaac
cagggcgagctcaaggcggtgctcgagctgttccgggccaccgcgcacctcgacgacgac
ctgctcgtgctctgcgacagccagtacgtcatcaactcggtcaccaagtggatgcccggg
tggaagcggaagggctggcggaagggcgacggcaagccggtgctcaacgtcgagctgctc
aaggagatcgacgccgagatccagggccgccgctaccgcttcgagtgggtcaagggccac
gcgaaccacccgctcaacgaggccgccgacgtgcgggcgcgggcggtggcgaccgcgttc
cagggccggagcgcgatccccgccggcccgggctgggcgggccacgacgccgacgagggc
gccgcctcccccgacgacacgacggagacggccgccgtcgcggccgacgccgagcgcgcg
gccgatcccgtgaccgcggcggcggaggagctggaagccgaggcgcccgcgcagccgggc
ctgttcgacttcgacgcgttcgacgaggagatcgcgccggagcccggcgacaccacgctc
acgatcgcgctcgaccgcgacacgatggcgcgcctcagcgcccacgcgcgcgagcgcggc
gtgagcgtcgacgaggccgtgcgcgagctgctgccctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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