KEGG C.michiganensis: CMM

Clavibacter michiganensis subsp. michiganensis: CMM_0878

Entry

CMM_0878 CDS C.michiganensis

Gene name araA

Definition L-arabinose isomerase (EC:5.3.1.4)

Orthology K01804 L-arabinose isomerase [EC:5.3.1.4]

Pathway cmi00040 Pentose and glucuronate interconversions
cmi01100 Metabolic pathways

Class Metabolism; Carbohydrate Metabolism; Pentose and glucuronate
interconversions [PATH:cmi00040]

SSDB

Motif Pfam: Arabinose_Isome Arabinose_Iso_C

Other DBs NCBI-GI: 148272057
NCBI-GeneID: 5173360
UniProt: A5CPB7

Position 1001346..1002863

AA seq 505 aa
MSRITTSLDHYEVWFLTGSQNLYGEETLQQVAEQSQEIARQLEEASDIPVRVVWKPVLKD
SDSIRRMALEANASDGTIGLIAWMHTFSPAKMWIQGLDALQKPFLHLHTQANVALPWSSI
DMDFMNLNQAAHGDREFGYIQSRLGVVRKTVVGHVSTESVRASIGTWMRAAAGWAAVHEL
KVARFGDNMRNVAVTEGDKTEAELKFGVSVNTWGVNDLVARVDAATDAEIDALVDEYETL
YDIQPELRRGGERHESLRYGAAIELGLRSFLEEGGFGAFTTSFEDLGGLRQLPGLAVQRL
MAEGYGFGAEGDWKTAVLIRAAKVMGSGLPGGASLMEDYTYHLVPGEEKILGAHMLEICP
TLTTGRPSLEIHPLGIGGREDPVRLVFDTDPGPAVVVAMSDMRDRFRIVANVVEVVPLDE
PLPNLPVARAVWKPAPDLATSAAAWLTAGAAHHTVMSTQVGVEVFEDFAEIARTELLVID
EDTTLKGFTKEVRWNQAYHRLAQGL

NT seq 1518 nt +upstreamnt +downstreamnt
gtgagccgcatcaccacctccctcgaccactacgaggtctggttcctcacgggcagccag
aacctctacggcgaggagacgctccagcaggtcgccgagcagtcgcaggagatcgcccgg
cagctcgaggaggcgtcggacatccccgtgcgcgtcgtgtggaagcccgtcctcaaggac
tccgacagcatccgccggatggccctcgaggccaacgcgagcgacggcaccatcggcctc
atcgcctggatgcacacgttcagccccgcgaagatgtggatccagggcctggacgccctg
cagaagcccttcctccacctgcacacgcaggccaacgtcgcgctgccctggagcagcatc
gacatggacttcatgaacctgaaccaggccgcgcacggcgaccgcgagttcggctacatc
cagtcgcgcctcggcgtcgtccgcaagacggtcgtcggccacgtgagcaccgagtccgtg
cgcgccagcatcggcacgtggatgcgagccgccgccggctgggccgcggtccacgagctc
aaggtcgcccgcttcggcgacaacatgcgcaacgtggcggtcaccgagggcgacaagacg
gaggccgagctcaagttcggcgtctcggtcaacacctggggcgtcaacgacctcgtcgcg
cgcgtggacgcagcgaccgacgcggagatcgacgcgctggtcgacgagtacgagaccctc
tacgacatccagcccgagctgcggcgcggcggggagcggcacgagtcgctccgctacggc
gcggccatcgagctcggccttcgctccttcctcgaggagggcggcttcggcgccttcacg
acgagcttcgaggacctcggcggcctccgccagctccccggcctcgccgtgcagcggctc
atggccgagggctacggcttcggcgccgagggggactggaagacggccgtgctgatccgc
gcggcgaaggtcatgggctccgggctcccgggtggcgcgagcctcatggaggactacacg
taccacctcgtccccggcgaggagaagatcctgggcgcgcacatgctcgagatctgcccc
acgctcacgaccggccgaccgagcctcgagatccacccgctcggcatcggcggacgcgag
gaccccgtgcgcctcgtcttcgacaccgaccccggccccgcggtcgtcgtcgcgatgtcg
gacatgcgcgaccgcttccgcatcgtcgcgaacgtcgtggaggtcgtgccgctcgacgag
ccgctcccgaacctgcccgtcgcccgcgccgtgtggaagcccgcgccggatctcgcgacg
agcgcagcggcctggctcaccgccggggccgcccaccacacggtcatgagcacgcaggtc
ggcgtcgaggtcttcgaggacttcgccgagatcgcgcgcaccgagctcctcgtcatcgac
gaggacacgaccctcaagggtttcaccaaggaagtccgctggaaccaggcgtaccaccgc
ctggcccagggcctgtaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)

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