KEGG   Clavibacter michiganensis subsp. michiganensis: CMM_2002
Entry
CMM_2002          CDS       T00529                                 
Symbol
pheT
Name
(GenBank) phenylalanyl-tRNA synthetase beta subunit (Phenylalanine--tRNA ligase beta chain) (YP_061664.1| phenylalanyl-tRNA synthetase, beta subunit [Leifsonia xyli subsp. xyli str. CTCB07]; ZP_00120533.2| COG0072: Phenylalanyl-tRNA synthetase beta subunit [Bifidobacterium longum DJO10A]). pfam01588, tRNA_bind, Putative tRNA binding domain. pfam03483, B3_4, B3/4 domain. This domain is found in tRNA synthetase beta subunits as well as in some non tRNA synthetase proteins. pfam03484, B5, tRNA synthetase B5 domain. This domain is found in phenylalanine-tRNA synthetase beta subunits. pfam03147,FDX-ACB, Ferredoxin-fold anticodon binding domain. pheT_bact: phenylalanyl-tRNA synthetas; High confidence in function and specificity
  KO
K01890  phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
Organism
cmi  Clavibacter michiganensis subsp. michiganensis
Pathway
cmi00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:cmi00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    CMM_2002 (pheT)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:cmi01007]
    CMM_2002 (pheT)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cmi03016]
    CMM_2002 (pheT)
Enzymes [BR:cmi01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     CMM_2002 (pheT)
Amino acid related enzymes [BR:cmi01007]
 Aminoacyl-tRNA synthetase
  Class II (U)
   CMM_2002 (pheT)
Transfer RNA biogenesis [BR:cmi03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    CMM_2002 (pheT)
 Prokaryotic type
    CMM_2002 (pheT)
SSDB
Motif
Pfam: B3_4 tRNA_synthFbeta FDX-ACB B5 tRNA_bind
Other DBs
NCBI-ProteinID: CAN02065
UniProt: A5CSJ1
Position
complement(2265506..2268049)
AA seq 847 aa
MRIPISWLGEHVELPAGVTPEDVHASLVKVGLEEEDVHAFSISGPVVVGQVLEASPEPQT
NGKTINWCSVRVAPEGATAADGGADVRGIVCGAHNFVVGDKVVVSLPGAVLPGPFPISAR
KTYGHVSDGMIASSRELGLGEEHDGILVLSSLGLDPEVGTDALALLHLDDRAVEVNVTPD
RGYAFSIRGIAREYAHATGARFTDPADALALLAADAPVQGVEVRVDDAAPIRGRSGADVF
VTRVVSGLDVSRPTPPWMVSRLTLAGVRSISLVVDITNYVMLELGQPLHGYDLDRLQGGI
VVRRAAEGETLVTLDGRERALHPEDLVIADGSGPVGLAGVMGGAATEIGAGTSRVLIEAA
GFDPVSIARTARRHKLPSEASKRFERGVDPRIAPAAAARAVQLLEDLAGGHAEGLGSILD
TTAPREAIELPLGYPASLVGVDYTADEVRHALVDVGCALEERDGILGVTPPTWRPDLRQR
ADLVEEVARIVGYDRIPAVLPVAPPGRGLTAAQRLRRQASIALAASGLSEVMGSPFASEE
QNARFGAADREDAPAVSLANPLDVAFPYLRRSLLPGLVDIARRNLSRGSTDLAIFESGTV
FLPRAGVAYGSPEMPPGAARPDADTLRALDAGIPPQPRHVGVLILGDAVPKQPGTPAQRA
GLVDALDAVRQLAHAVGVEIRFEQGSHIAMHPGRTAAVEAVTADGPVIVGFAGELLPALA
AELDLPERVALAEVDLDRLVGLAGGAVEVRTLTSMPVATQDLSLVVPLEVPAGELLRTVI
AGAGELLESARLVDDYRGPGVEAGTRSLTFALRFRAPDRTLTAAEASAARDGSVRLAAER
FGAALRE
NT seq 2544 nt   +upstreamnt  +downstreamnt
gtgaggatccccatcagctggctcggcgagcacgtcgagctccccgcgggggtcaccccc
gaggacgtccacgcctccctcgtgaaggtgggcctcgaggaggaggacgtgcacgcgttc
tcgatctccggccccgtcgtcgtcgggcaggtgctcgaggcgagccccgagccccagacc
aacggcaagaccatcaactggtgctccgtccgcgtcgcgcccgagggcgccaccgcggcc
gacggcggcgcggacgtgcgcggcatcgtctgcggcgcgcacaacttcgtcgtcggcgac
aaggtcgtggtgagcctgcccggcgcggtgctccccggcccgttccccatcagcgcgcgg
aagacgtacgggcacgtgtccgacggcatgatcgcgtcgtcgcgcgagctcggcctgggg
gaggagcacgacgggatcctcgtcctctcctcgctcggcctcgaccccgaggtcggcacg
gacgcgctcgcgctcctgcacctcgacgaccgcgcggtggaggtgaacgtcacgcccgac
cgcggctacgcgttctccatccgcggcatcgcccgggagtacgcgcacgccacgggcgcc
cggttcaccgaccccgccgacgcgctcgcgctgctcgcggccgacgcgcccgtccagggc
gtcgaggtgcgcgtcgacgacgccgcccccatccgcggccgctccggcgccgacgtgttc
gtcacgcgcgtggtctcgggcctcgacgtgtcccggccgacgccgccgtggatggtgtcc
cgactgaccctcgcgggcgtccgctccatctcgctcgtggtcgacatcaccaactacgtg
atgctcgagctcggccagcccctgcacgggtacgacctcgaccggctgcagggcggcatc
gtcgtccgccgcgccgccgagggcgagacgctcgtcacgctcgacgggcgcgagcgcgcg
ctgcaccccgaggacctcgtcatcgccgacggctccggcccggtcgggctcgcgggcgtc
atgggcggcgcggccaccgagatcggtgcgggcaccagtcgcgtgctgatcgaggcggcc
ggcttcgaccccgtgtcgatcgcccgcacggcccgcaggcacaagctgccgagcgaggcg
tccaagcgcttcgagcggggagtggatccgcgcatcgcgcccgctgccgcggcgcgcgcc
gtgcagctcctcgaggacctcgcgggcggccacgccgagggcctcggctcgatcctcgac
acgaccgcgccgcgtgaggcgatcgagctgcccctcggctacccggcatcgctcgtcggc
gtcgactacacggcggacgaggtgcgccacgcgctcgtcgacgtcgggtgcgcgctcgag
gagcgcgacgggatcctcggcgtcacgccgccgacctggcgacccgacctccgccagcgc
gcggacctcgtggaggaggtcgcgcgcatcgtcggctacgaccggatccccgccgtgctg
cccgtcgcgccccccggccgcggcctcaccgccgcgcagcgcctccgacgccaggcctcg
atcgcgctcgccgcgtccgggctcagcgaggtcatggggtcgccgttcgcgtccgaggag
cagaacgcccgcttcggcgcggccgatcgggaggacgcgcccgccgtgagtctcgcgaac
ccgctcgacgtcgcgttcccgtacctccgccgctcgctgctgccggggctcgtcgacatc
gcgcggcgcaacctgtcgcgcggatccaccgacctcgcgatcttcgagtccggcaccgtg
ttcctgccccgcgccggcgtcgcgtacggctctcccgagatgccgcccggggccgcgcgc
cccgacgcggacacgctgcgggcgctcgacgcgggcatcccgccgcagccgcgccacgtc
ggcgtgctgatcctcggggacgccgtgccgaagcagccgggcaccccggcgcagcgcgcg
ggcctggtcgacgcgctcgacgcggtccggcagctcgcgcacgcggtgggcgtggagatc
cgcttcgagcagggctcccacatcgccatgcacccgggccgcacggccgcggtcgaggcc
gtgaccgcagacggccccgtcatcgtcggattcgccggggagctcctgccagcgctcgcc
gccgagctcgacctgcccgagcgcgtcgcgctcgccgaggtcgacctcgaccggctcgtc
gggctcgcgggcggcgcggtcgaggtgcgcacgctcacctcgatgcccgtcgccacgcag
gacctcagcctggtcgtgccgctcgaggtcccggcgggggagctgctccgcacggtgatc
gcgggcgcgggcgagctgctggagtccgcccggctcgtggacgactaccgcggtcccggc
gtcgaggccggcacccgctcgctcacgttcgcgctccgcttccgggctcccgaccgcacc
ctcaccgcggccgaggcgagcgcggcccgcgacggatccgtgcggctcgccgccgagcgg
ttcggcgcggcgctccgggagtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (29)   

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