KEGG   Callorhinchus milii (elephant shark): 103180421
Entry
103180421         CDS       T03088                                 
Name
(RefSeq) LOW QUALITY PROTEIN: tenascin
  KO
K06252  tenascin
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk04510  Focal adhesion
cmk04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103180421
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103180421
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:cmk00536]
    103180421
Glycosaminoglycan binding proteins [BR:cmk00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   103180421
SSDB
Motif
Pfam: fn3 Fibrinogen_C EGF_2 EGF_Tenascin Pur_ac_phosph_N NDNF
Other DBs
NCBI-GeneID: 103180421
NCBI-ProteinID: XP_042193216
Position
Unknown
AA seq 1922 aa
MGLQWQALACILSAILLGQAQGGVLKDILRHKRSPVEPEEENVTLPLGTQPINFNHVYNI
NVPLGALCSVDLDSPDGSXLSATADSGDHHIEHTVDGENQIVFTHRINIPRQACACGQAP
DLQDLLQRLELLEGQVSSLRDQCANGGCCGNGAQSGTGRVDVKPFCGGHGNYSTDSCGGC
VCDPGWSGPNCTESRCPDDCGDQGRCVDGACQCFEGYAGAGCDRELCPVDCGQHGRCADG
ECVCDEGFTDHDCSEIICPRDCYDRGRCVEGQCFCDQGFAGEDCGELSCPGDCRQRGACV
EGRCVCQEGFAGEDCGRPTCPGDCRRRGLCLGTGECVCDQGFTGEDCGELSCPSDCHDRG
ACVEGRCVCQEGYAGEDCGRWSCANDCHDRGACVEGRCLCREGFAGEDCGELSCPGDCRQ
RGACVRGRCVCGEGYAGEDCGRVRCPHDCHDRGRCVDGRCLCQEGFAGEDCGEPTCPGDC
HQRGRCANGQCVCDEGFAGADCGELACPDRCNNRGRCLAGQCVCIHPFTGPSCALLACAN
HCSHRGRCVDGRCVCDEGYIQEDCSAVSPAKNLKVTEVTPETLDLEWYNEVRVNEYLITY
VPTSPGGLQLEMRVDGDKMSSTVQELEPGVEYFINVYAILNNHRSVPVSARVATHLPTPD
GLRFKSVKETSVHVAWDPLDIPFDGWELVFKAPKEDNGEISHNLKQDQLSVTQTGLAPGE
EYDVSLYIIKNQTRGPEFKKPLTTMIDSPSEVEVNKVTDTTAHVTWFKPAARIDGINLSY
GTPGGERTTVQLPDTESTHSISGLEPDTEYQVSLVSNRGQMQSVPATNTFRTDIDAPQNL
RVVTQTDQSITLQWKNTRAPAGSYRVKYAPLSGGKHMETIVERSNEANTKITMTGLQPGT
EYGFGVSAFQGNNRESAPATINAATELDDPKDLEVSERTVDSITLRWHRPQAVIKQYRIY
YITPSGQRSERIVRGDAITFILVDLDAGLEYTITLVAERDSEKSQGVTITSATVGSEMEY
SGTGEGEISNITVSDVTSGGLRVSWTAAIGVYDHFVIEYRDEFAGASDKAEVSVPGDALS
ADLTGLSPSTPYNITLYGIVGDQRSQPLNTVVGTASLTTPFEEPASHTAAPTAQLHREAS
LTPHSPTIDSGKGVTRSKLGDLTVTDATSQSLKLSWNAGNGSFDSFLVVVRDSAGVYRPL
EIPLSGDIRNAEVSGLSDSTHYKVYLYGVTGEWRSDPLKADITTEAEPELGNLMVSDITP
SSFKLSWTALGPYEGFDVEIRDSDGLLDPINLTLAADVRFLDVPQLSADTDYEISFYGLI
HGQRTKPLYAEASTEAEPELDNLSVSNVTSDGFTLTWTTDDSAFDIFHIKIRDSQKESAP
LDHSVAGELRTADIRGLRDGTEYEITVHGIAEGQRSQALSTVANTALGAPRGLRFENVTD
STVTLRWDHPRAKVNSFRITYVPTDGGAFQSVVVDGTKTKTTLYKLIPATEYRITIVSLK
GFEESESISDTVLTVLDNPSALGVVNVTDSEALLVWQPTIAAVDGYVIAYTADYGITETE
QVSGNTVQAELISLHPGTHYTVWMHAVKGSLQSLVSSTTFTTAIDPPTDLRASEITTNNA
LLSWKVPTAQITGYTLTLESTDGNMQQVVLSDTDTSYSLAQLVPSMRYHVKLQANKGSQR
SKIAETFFTAGRVLYPHPKDCSQTLLNGEASSGLYTIFLNGNMSDPLKVYCDMTTDGGGW
VVFQRRQNGNVNFYRNWRNYSAGFGDPSDEFWLGLQSLHKITSHGRYELRVDLRDEGNSA
YAVYDKFLVTDPRSRYKLHIGEYSGTAGDSLTYHQGRPFSTKDRDNDIAVTNCALSYKGA
WWYKNCHRVNLNGVYGNRRHSQGINWYHWKGHEHSISFVEMKLRPHNFRDLQQRKRRQPA
AR
NT seq 5769 nt   +upstreamnt  +downstreamnt
atggggcttcagtggcaggctttggcttgcatcctgtcggctattttgctgggacaagcc
cagggcggggtgctgaaggatatcctcaggcacaagcggagcccggtggagccggaggag
gagaacgtcactctgcccctcgggactcagcccataaacttcaaccacgtctacaacatc
aacgtgccgctgggggctctttgctccgtggacctggactcgccggacggctctngcctg
agtgctacggccgattccggcgaccaccacatagagcacacggtggacggggagaaccag
attgtcttcactcaccgcatcaacatcccgcggcaggcctgcgcctgcggacaggctccc
gacctgcaggatctcctccaacgcctggagctgctggagggccaggtgtcctctctcagg
gaccagtgcgccaacggaggctgctgcgggaacggcgcccagtcgggaaccggtcgggtg
gacgttaagcccttctgcggcggccacggcaactacagcaccgactcgtgcggcgggtgc
gtgtgcgacccgggctggagcggacccaactgcaccgagtcccggtgcccggacgactgc
ggcgaccagggccggtgcgtggacggcgcctgccagtgcttcgagggctatgcgggcgcg
ggctgcgaccgggagctgtgcccggtggactgcgggcagcacggccggtgcgcggacggc
gagtgcgtgtgcgacgagggcttcaccgaccacgactgctccgagatcatctgcccccgc
gactgctacgaccgcgggcggtgcgtcgaggggcagtgcttctgcgaccagggcttcgcc
ggcgaggactgcggggagctgtcctgccccggggactgccgccagcggggcgcgtgcgtc
gagggccggtgcgtgtgccaagagggcttcgccggggaggactgcgggcggccgacctgc
cccggggactgccgccgccgcgggctgtgcctgggcaccggggagtgcgtgtgcgaccag
ggcttcaccggcgaggactgcggggagctgtcctgcccgagcgactgccacgaccggggc
gcgtgcgtcgagggccggtgcgtgtgccaagagggttacgcgggcgaggactgcgggcgg
tggtcgtgcgccaacgactgccacgaccggggcgcgtgcgtcgagggccggtgcctgtgc
cgggagggcttcgccggcgaggactgcggggagctgtcctgccccggggactgccgccag
cggggcgcgtgcgtgcggggccggtgcgtgtgcggcgagggttacgcgggcgaggactgc
gggcgagtgcgctgcccgcacgactgccacgaccggggccggtgcgtggacggccggtgc
ctgtgccaagagggcttcgccggggaggactgcggggagccgacctgccccggggactgc
caccagcggggccggtgcgccaacggccagtgcgtgtgcgacgagggcttcgccggggcg
gactgcggggagctggcctgccccgaccgctgcaacaaccggggccggtgcctggccggt
cagtgcgtctgcatccaccccttcaccggcccgagctgcgcgctcctggcgtgcgccaac
cactgcagccaccggggccgctgcgtggacgggcggtgcgtctgcgacgagggctacatc
caggaggactgctccgccgtgtctcccgccaagaacctaaaggtaaccgaagtgactccc
gaaaccctggacctggagtggtacaacgaggtgcgagtgaacgagtacttgatcacctac
gtgccgaccagcccggggggcctgcagctggaaatgagagtggacggagacaagatgtcg
tccaccgtccaagaactggagcccggcgttgaatacttcatcaatgtctacgccatcctg
aacaaccaccggagcgttcccgttagtgccagggtagcaacgcatctgccaacgccagat
ggattacgtttcaagtcagtcaaagagacctcggtgcacgtggcctgggaccccctggat
attccattcgatggctgggagctggtgttcaaagcccccaaagaggacaatggagaaatt
tcccacaacttgaagcaggaccagctctcggttactcagacgggcttggcgccgggagag
gaatatgacgtcagcctctacattataaaaaaccaaacccgtgggcccgagtttaaaaag
cccctcacgacaatgatcgactcaccgagcgaggttgaggtgaacaaagtgacggacacc
acggcccacgtcacctggtttaaaccagccgcccgaatcgatgggatcaacctgtcctac
gggaccccggggggcgagaggaccaccgtccagcttcccgacaccgagagcacccattcc
atctccggcctggaacccgacacggagtaccaagtctccctggtctccaaccgtggccaa
atgcaaagcgtccctgccaccaacaccttcagaacagatatcgatgccccccaaaacctt
agggtggtgactcagacagatcagagcatcaccttgcagtggaagaacaccagagcccct
gccggcagctacagggttaagtacgcacctctctcaggaggaaaacacatggaaaccatc
gtggagagaagcaatgaagccaacaccaaaatcacaatgactggtctccagccaggaacc
gagtacggctttggagtcagcgcctttcagggaaacaacagagaaagtgctcctgccacc
atcaacgcagcaactgagttggatgatccgaaggatttggaagtgagcgagaggacagtg
gacagtatcaccctgcggtggcatcgcccacaggcggtgatcaagcagtaccgcatctac
tacatcacgccgtccggccagaggagcgagcggatagtccggggggacgccatcaccttc
attctggtggacctggacgcgggactggagtacaccattactctggtggccgagagagat
agtgagaagagccaaggggtcaccataacctctgccaccgtcgggtccgagatggagtat
tccgggaccggtgagggggagatcagtaacataacggtttctgacgtgacctcgggaggc
ctccgagtttcctggacggcagccataggagtctatgatcattttgtcattgaatataga
gatgagtttgccggagccagtgataaggcagaggtttccgtgcctggtgatgctttgtca
gccgacttaacaggcttatcgccctctactccatataacattactctttacggaattgtt
ggtgatcaacgctcacagcctctgaacactgtggtcggcacagcttccctaaccaccccg
tttgaggagccggcatctcacacagcagcccccacagctcagctccacagagaagccagc
ctcaccccccactcgcccacaattgactcaggaaaaggggtgacgcgtagcaaactggga
gacctcactgtgacagacgctacgtcgcaaagccttaagctctcttggaatgcgggaaac
ggatcttttgacagtttcctggttgtggtcagagattctgccggggtttaccgaccactg
gaaataccattaagcggtgacattcgtaacgcagaggtgtccggcctctcggatagcaca
cactataaggtatatttatacggagtgacaggagagtggcgttcagaccctttgaaagca
gacatcacaacagaggcagagcctgaacttggcaacctaatggtctcagatattacgccc
agcagcttcaagctctcttggacagcgctggggccatacgaaggctttgatgtagaaata
agagactctgatgggttgctggacccaataaacctcacgctggcagccgatgtgcgcttt
ctagacgtcccgcaactatctgctgacactgattatgagatttccttctatgggttaatt
catgggcagcggacaaaacctctgtatgctgaagcgagcacagaagctgaaccagaattg
gacaacttgtcagtttccaatgtaacctccgacggcttcaccctgacctggacgacagac
gacagtgcctttgatatctttcatattaaaattagggattcccaaaaggaatctgccccc
ctggaccactcagtggcaggggagcttcgcacagctgacatccgaggtctgagagacggc
accgagtacgagataaccgttcatggtattgctgagggccagcggtcacaggcattaagt
actgtggccaacacagctctgggagctccgaggggtctccggttcgaaaacgtcacagac
agcacagtgacactcagatgggaccatccaagggcaaaagtcaacagctttaggatcact
tatgtaccaactgacggaggtgcgtttcagagtgtggttgtggatggcaccaagacaaaa
accactctgtacaaactcatcccggccactgaatatcgaatcaccatcgtgtctctcaaa
gggtttgaggaaagtgaatccatttcagacaccgtgctcacagttctggacaacccttct
gccttgggagtcgtgaacgtcactgattcggaagcgctgctggtgtggcaaccaaccatc
gctgcagtggacggttacgttatcgcctacactgctgattacggtattacggaaacagag
caggtttcggggaataccgtacaggctgaactcatctccctccacccgggcactcactac
actgtgtggatgcacgcagtcaaaggctctctgcagagtttggtttcttccactacattc
acaacagctatcgaccctcccacagacctgcgagcaagtgaaattaccaccaacaacgca
ctcctctcgtggaaggttcccacggcccagatcaccggctacactctgacgttggagtcc
acggatggcaacatgcagcaggtcgtgctcagtgacaccgacacgtcctacagtttggct
cagctggtcccgtcgatgaggtaccacgtgaaactccaggccaacaagggatcccagaga
agcaaaatagcagagacgtttttcacagcaggccgtgttttgtacccacaccctaaggat
tgctcacagaccttgttgaacggcgaggccagttctggactctacaccatattcttgaac
ggaaacatgtcagatccactgaaggtgtactgtgacatgaccactgatggcggtggatgg
gtggtctttcagaggcggcagaacggaaacgtcaacttctatagaaactggaggaattac
agtgccgggtttggtgatccctcagatgagttctggctgggacttcaaagccttcacaag
ataacgtcccacggccgttacgaactacgtgtggacctgcgagatgagggtaactcggcg
tacgctgtctacgacaagttcctggtgacagatcccagaagtcgctacaagctgcacatt
ggggagtacagcgggaccgcaggtgattctctgacttaccaccagggccggccattctcc
accaaggacagagacaatgacatagccgtcaccaactgcgctctgtcctacaagggcgct
tggtggtacaagaactgccatcgggtcaatctgaacggagtctacggaaatcgccgccac
agccagggcatcaactggtaccactggaagggacacgagcactccatcagtttcgtggag
atgaaattgagacctcacaacttccgagacctgcaacagagaaagaggcgccaacccgca
gcccgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (156)   
   KEGG ORTHOLOGY (1)   
   RefGene (152)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (171)   

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