KEGG   Callorhinchus milii (elephant shark): 103182693
Entry
103182693         CDS       T03088                                 
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk03022  Basal transcription factors
cmk03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103182693 (gtf2h2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    103182693 (gtf2h2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmk03021]
    103182693 (gtf2h2)
   03400 DNA repair and recombination proteins [BR:cmk03400]
    103182693 (gtf2h2)
Transcription machinery [BR:cmk03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     103182693 (gtf2h2)
DNA repair and recombination proteins [BR:cmk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     103182693 (gtf2h2)
SSDB
Motif
Pfam: Ssl1 VWA_2 C1_4 VWA C1_2
Other DBs
NCBI-GeneID: 103182693
NCBI-ProteinID: XP_007897978
Position
Unknown
AA seq 393 aa
MYDEPERTKRWEGGYERTWEVLKEDESGSLKASVDDLLFKEKRKRVCEHYGQVRLGMMRH
LYVVVDMSRSMEDQDLKPNRLACTLKLLEYFVEEYFDQNPISQIGIISTKTKRAEKMTEL
AGNPKKHIEALKKVVGVACSGEPSLYNSLSLAMETLKHMPGHTSREVIVIFSSLTTCDPS
NIYDLIKCLKAVKIRVSVIGLSAEVRVCTMLTRETGGTYHVILDENHFKELLMYHVSPPP
ASSTSECSLIRMGFPQHTMASFSDQDAKPSFSMAHLDSSSGPVLTLGGYYCPQCRAKYTE
LPVECKVCGLTLVSAPHLARSYHHLFPLDVFRETPLERIQGERYCQGCQGEMKDQNVYIC
TVCQNAFCLECDIFIHNTLHCCPGCIHNQSDPQ
NT seq 1182 nt   +upstreamnt  +downstreamnt
atgtatgacgaaccagaaagaacaaaacggtgggaaggaggttatgagaggacttgggaa
gtccttaaagaagatgagtcgggttcacttaaagctagtgttgatgatctcctcttcaaa
gaaaaaaggaaaagagtttgtgagcactatggacaagttagacttggaatgatgcgacac
ttgtatgtggtagtagacatgtcgagatcaatggaagatcaggatttgaaacctaatcga
cttgcctgtacactaaagttgctggaatattttgtagaagaatactttgaccaaaatccc
attagtcagatcggtatcattagtacaaaaactaaacgggcagagaagatgaccgagctt
gcaggcaacccaaagaaacatattgaagcactgaagaaagtggttggtgttgcatgcagt
ggggagccgtcactttataattcactcagcttggcaatggaaactctaaagcacatgcca
ggacacaccagtcgtgaagtcattgttatttttagcagccttacaacttgtgatccatcc
aacatttatgacctgattaagtgcttgaaggctgttaaaattcgagtgtcagtgattggt
ctgtcggcagaagttcgtgtctgtaccatgctcacccgtgaaactggcggtacttaccat
gttattttagatgagaaccatttcaaagagttgcttatgtatcatgtgagccctccacct
gccagctctacctcagagtgttcccttattcgtatgggtttcccccagcatacaatggca
tcattttcagatcaagatgcaaaaccatcttttagtatggcacatttagatagcagtagt
gggccagtgttaacacttggtggatattattgcccccagtgcagagctaaatatactgaa
ctacctgtagaatgtaaagtatgtggtcttacattagtgtctgcgccccacttggcaaga
tcttatcaccacctgttcccattggatgtgttcagagaaactccactggagaggattcag
ggagaaagatactgtcaaggctgccaaggggagatgaaagatcagaatgtttacatctgc
actgtatgccagaatgccttttgtctggagtgtgacatttttattcataacacattgcat
tgctgtcccgggtgcatccacaaccaatctgatcctcagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (30)   

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