KEGG   Callorhinchus milii (elephant shark): 103183604
Entry
103183604         CDS       T03088                                 
Symbol
usp16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16 isoform X1
  KO
K11844  ubiquitin carboxyl-terminal hydrolase 16/45 [EC:3.4.19.12]
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    103183604 (usp16)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cmk01002]
    103183604 (usp16)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cmk04121]
    103183604 (usp16)
Enzymes [BR:cmk01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     103183604 (usp16)
Peptidases and inhibitors [BR:cmk01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   103183604 (usp16)
Ubiquitin system [BR:cmk04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    103183604 (usp16)
SSDB
Motif
Pfam: UCH zf-UBP JHY
Other DBs
NCBI-GeneID: 103183604
NCBI-ProteinID: XP_042189891
Position
Unknown
AA seq 845 aa
MGKKKTKRNSQQDDESSDNLVGRCEHIRRGLDCSQIKKLLPQSQWKACEDCKCDSKTNQK
QEESDESPTVWLCLKCGHRGCGRESEEQHAIKHYEKLHSDPHCVVLSLDHWGVWCYLCDD
EVHYGAKGQLGQTIEYIRKRTAAKYAKETVLPQTNLKEQKNEETEEKETKSEKPEQENTL
TQTITQIPVKGFSNLGNTCFFNAVMQNLSQTYVLNELIQEVKLNRTAITLVPPSDSNLGP
LEIQVDQPGPLTSAMCQFLLDIQDTKKNVVTPKELFTQVCRKAIRFKGFQQQDSQELLRY
LLDGMRSEEIKRIGAGILIALNYSSEMMEDEESRKTVKVYEKEGSTQNFVDRIFGGALTS
TIMCEECKTVTLVKESFLDLSLPVLDVQIDKKKSLGKGGRKTTEDDQNENSEYINGNVIS
KNRGDVSTGITKHQQKKAKKQAKKQAKTQRRNQKLQAKVLDFSDLSTVENLLDEGESSED
VSSEDKMQLNSHSVQEEISPEQSPCGNLSSDQCLETTLNECTEDCNKELSQENAEAENED
EESSETVQMDHFPISNNDSLDIFNSNLVNENRFNTLCPNEEDMINNMNKLNLNDCLVNHD
EIMIDFKNCENSSENTHHPLSSTKDKRVVCLDPERAFCTLANREIVNLQDCSIGACLRHF
TQEEKLTGANKLLCEECTQSMHQGGSKTNPNDDQNVYTNAQKQMLISSAPPVLTLHLKRF
QQLGFNLRKVNKHIHFPQVLDLAPFCAVNCKNVAKECVKVLYSLYGVVEHSGTMRSGHYT
AYVKVRTPSCQLSEHVRNTDTPKAVTEAEPSKGSWFHISDAHMQAVPQTKVLSAQAYLLF
YERIL
NT seq 2538 nt   +upstreamnt  +downstreamnt
atgggaaagaaaaaaacgaagcggaattctcagcaggatgatgaatcatctgataatttg
gtaggacggtgtgagcacattcgtaggggattggactgcagccagattaagaagctgtta
ccccagagtcagtggaaggcttgtgaagactgcaaatgtgattctaaaactaaccaaaaa
caagaggaatctgatgaaagtcccacggtctggttgtgcttgaagtgtggacatcggggt
tgtgggagggaatcagaagaacagcatgctattaagcattacgagaagctacattcagat
ccccattgtgttgttcttagtttggatcactggggtgtttggtgctatttgtgtgatgac
gaagttcattacggagccaagggtcagttggggcaaaccatagaatacatccgaaaaaga
actgctgctaagtatgccaaagaaactgtactgcctcaaacaaatctaaaagaacagaag
aatgaagagacagaggaaaaagagacaaaatctgagaagcctgaacaagaaaatacttta
acacaaacgattacacagataccagtaaaaggattcagcaatcttggcaacacttgtttt
tttaatgctgtgatgcagaatttatcacagacctatgttctgaatgagttgattcaagag
gtaaaactgaatcggactgcaattacacttgtaccacccagtgactcaaatctgggtccc
ttggaaattcaggttgatcagccggggccactgacatcagccatgtgtcagtttcttctt
gacatccaagatactaagaaaaatgttgttaccccaaaggaactgttcactcaggtctgc
agaaaggcaatacgatttaaggggtttcaacagcaggatagtcaggagttgcttcgttat
ctattagatggaatgagaagtgaagagatcaaacgtataggtgctggcattttaatagcc
ttaaattactcctcagaaatgatggaagatgaagaatccaggaaaactgttaaagtgtat
gagaaggaaggatccacacagaactttgtggaccggatttttggcggcgcattgactagt
acgataatgtgtgaagaatgtaaaacggtcactttagtgaaagaatcctttttagacttg
tccctgcctgttttggatgtacagattgataagaaaaaatcactggggaaaggtgggagg
aaaactactgaagatgatcagaatgaaaacagtgaatatatcaatggaaatgttatttcc
aagaacagaggtgacgtttcaactggcatcactaaacatcaacaaaagaaggcaaagaaa
caagctaaaaagcaagccaagactcagcggcgaaatcaaaagctgcaggcaaaagttctt
gatttcagtgatttgtcgactgttgagaatcttttggatgagggtgagagcagtgaagat
gtgtcttcagaggacaagatgcaactcaattcacattctgtgcaggaagagatctcgcca
gaacagagcccatgtggcaatttatcttctgaccagtgtcttgagactacattaaatgaa
tgcactgaagattgtaacaaagaactaagccaagaaaatgctgaggcagaaaatgaggat
gaggagtcaagtgaaactgtgcaaatggatcattttcctatctccaataatgattcttta
gatatctttaactcaaacctagtaaatgagaaccgatttaatacactttgtccaaatgaa
gaggatatgatcaataatatgaataaattgaacttgaacgattgtttagtgaatcatgat
gaaataatgatagattttaagaactgtgaaaactcatctgaaaatacacatcatcctctg
tcttccacgaaagataaacgggtggtttgtctggatccagagagagcattttgcacgctt
gcaaaccgagaaatagtcaatttgcaggactgttccattggggcctgtttacgacatttt
acccaggaggagaaacttactggagcaaataaactgctgtgtgaagaatgtacacaaagt
atgcaccaaggtggatcaaagaccaatccaaatgatgaccagaacgtttacacgaatgcc
caaaaacaaatgcttatttcatctgctcctccagttcttacacttcacttgaaaagattc
cagcagttggggtttaatcttcgtaaagtaaacaagcacatccattttccacaagtgctt
gatcttgctccattctgtgctgtaaattgcaagaatgtggcaaaagagtgtgtgaaggtt
ttgtacagcctatatggtgtggtagagcacagtggcacaatgaggtctggacattatact
gcctatgtcaaggtacgcactccaagctgtcagctctctgaacatgtgcggaatacagat
acaccgaaagcagtgactgaagcagagccatccaaagggagctggttccatataagcgat
gcacacatgcaagcagtgcctcagactaaagtgctaagtgcccaagcctacctcctgttt
tatgagagaattctttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (51)   

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