KEGG   Callorhinchus milii (elephant shark): 103189647
Entry
103189647         CDS       T03088                                 
Symbol
smarcal1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
  KO
K14440  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
cmk  Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cmk03036]
    103189647 (smarcal1)
Chromosome and associated proteins [BR:cmk03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    103189647 (smarcal1)
SSDB
Motif
Pfam: HARP SNF2-rel_dom Helicase_C ResIII ERCC3_RAD25_C CaM_bind Flavi_DEAD TK DEAD_2
Other DBs
NCBI-GeneID: 103189647
NCBI-ProteinID: XP_007908299
UniProt: A0A4W3J5J4
Position
Unknown
AA seq 885 aa
MPPILTEEQKRKIEENRQMALARRAERQQQQQNCAASSGSGSLVQGFPCQPQAATTNPTQ
QRAVVSPPSAGGEIHHRDSPKPALASTGNGGRFQLTTGSTSELSRGSPGRTQTVFTKSEV
TGVAKFYSTGQTFIPLGRPGQARAARAHASNSAATSGSRTPSFTQGRCVSQSNSRFRVEV
GYNPELILLFKTIPSRSYDPASKMWNFSLDDYNALMTMVRKLPSAGLEPLDGAEAGTSRA
TADGSYSSDTGGRVTPGTALSTITEMGNVWKKSEAVVRGRCQLLSRARFEVEIGYHEGVI
TAFKQMESRNYNAKTRRWSFLLEDYKMLFKRLGAIPGVEVEPFPRGVVQVFLPQFEKSQA
GQLDIPEADLSQVDPLLVQSLMPFQRDGVDFAVFQGGRLLLADDMGLGKTIQAICIAAYY
HKEWPLLVVAPSSVRFTWAEAFHRWLPSVDPQSINVIVKGKDNLSSAQIHIISYDLLSKI
AKQLAERAFKVIIMDESHFLKNVKTARCRVATPLLKAAKRVILLSGTPAMSRPAELYTQV
SVIRPKIFPQFHQFGERYCDAKRLPWGWDYSGSSNLLELKLLLEESIMIRRLKSDVLSQL
PSKQRKMVVVEPEGIGVKAKAALEMAAREVAKVHKTKSQEREALMLFYNSTAVAKLQAVI
EYVMDLLESGREKFLVFAHHKLILNAICEALEKKGVGFIRIDGKTASADRQSLCQRFQLS
DKCCVAVLSITAANMGITLSSADLVVFGELFWNPGILLQAEDRVHRIGQTNSVNIHYLVA
RGTADDYLWPIIQEKVKILGQVGISEGNFSETESKDYFFKGPKQKKIADFFQTAMAEDDW
MDEALVEAVDTCQDMEAGLEPAPVPDTDPEESPAKKRLMEDYFLK
NT seq 2658 nt   +upstreamnt  +downstreamnt
atgccgcccattctgaccgaggaacagaaacgtaagatcgaggagaaccgtcagatggcg
ctggccaggcgagcagagcgacaacaacaacagcaaaactgcgctgcttcctcaggctct
gggagcctcgttcaggggtttccctgccagccccaggccgccaccaccaacccaacccaa
cagagagctgtcgtatctcccccctcagcgggtggggaaatccaccacagagactcgcca
aagcctgcccttgcgagcacgggcaatggtgggcgtttccaactgactaccggctctaca
agcgagcttagccgtggcagcccaggccgcacgcagacagtgtttaccaaatcggaggta
accggcgtggcaaaattttattccaccggtcagacttttattccactgggcagacctggc
caggccagagcagccagggcccacgcttctaactcagctgcaacgtcaggctccagaact
ccgagcttcactcagggccgctgtgtgtctcagagtaacagtcgcttccgagtggaggtg
ggctacaacccagagctcattctgctcttcaaaactatccccagcaggagttatgatcca
gcctccaaaatgtggaacttcagcctggatgattacaacgctctgatgacgatggtgagg
aagctgccgagtgctgggttggagcctctggacggggcagaagctgggacatctcgagcc
acagccgatggttcgtactcctccgacactggggggagggtcactcccggaactgcctta
agcaccatcacggagatggggaacgtctggaagaaatcggaggctgtggtgcgaggacgt
tgtcagctcctgtctcgcgctcgcttcgaggtggagattggttatcacgaaggcgtgatc
acagccttcaaacagatggagtccaggaattacaatgccaagacgaggagatggagcttt
ctactggaggattacaaaatgctgtttaaaaggctgggtgcgatccccggggtggaagtg
gagccgtttccccgtggagtggtgcaggtgttcctgccgcagtttgagaagtcccaggcg
gggcagctggacattcccgaggcagacttgtcccaggtcgatcccctgctggtccagagc
ctcatgccgttccagagagatggagtcgacttcgctgtgttccagggtggccgcttgctg
ctggctgatgacatgggtctggggaagaccatccaggcgatctgcatcgctgcctattac
cacaaggaatggcctctgcttgtggtggcgccctcatccgtcaggttcacctgggctgag
gctttccaccggtggctgccttcagttgatcctcagagcatcaatgtcatcgtcaaaggg
aaggacaatctctcctcagctcagatccacatcatcagctatgacctgctcagcaaaatt
gccaaacagctggcggagagagcattcaaggtcatcatcatggatgagtctcattttctg
aagaacgtgaagacagcgcggtgcagagttgccactcctctactgaaggctgctaagaga
gtgatccttctgtctggcaccccagcgatgtccaggccggcagagctctacacacaggtg
tctgtcattagacccaagatcttcccgcagttccatcagtttggagagcgctattgtgat
gccaaacggcttccctggggctgggactattcgggatcctccaatctgctggagctgaag
ctgctgctggaagagtccatcatgatccggcggctgaagtctgacgtgctctcccagctg
ccctccaaacagcgcaagatggtggtggtggagcctgagggcatcggggtgaaagccaaa
gccgcgctggagatggcagccagagaggtggcaaaggtccataaaacaaaatctcaggag
agggaggcactaatgctcttctataactcaactgctgtggccaaactccaagccgtcatc
gagtatgtcatggatttgctggagagtggccgagagaagttcctggtcttcgctcatcac
aaactgatcctcaacgccatctgtgaggctctggagaagaagggagttgggtttatccgt
attgatgggaaaacggcctccgctgaccgccagtcgctgtgccagaggttccagctgtct
gacaagtgctgcgtggctgtgctctccatcaccgcagccaacatgggcatcaccctgtcc
tcggccgacctcgtggtctttggcgagctcttctggaaccctggtatcctgctccaggct
gaggaccgggttcacagaataggacagaccaactccgtcaacattcactacctggttgcc
aggggaacggctgatgactacctgtggcccatcattcaggagaaggtgaagattctggga
caggtcgggatatctgagggcaacttttccgagacggagtccaaagattactttttcaag
gggcccaaacagaagaagatcgcagactttttccagacagcgatggcagaggatgactgg
atggatgaggccctggtggaggctgtcgacacctgtcaggacatggaggctggtctggaa
cctgccccggtcccagacacagaccctgaggagagtcccgccaaaaagagactgatggag
gattattttctgaaatga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (60)   
   KEGG ORTHOLOGY (1)   
   RefGene (56)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (9)   
All databases (79)   

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