KEGG   Carnobacterium maltaromaticum: BN424_1328
Entry
BN424_1328        CDS       T02342                                 
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V alpha subunit
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
cml  Carnobacterium maltaromaticum
Pathway
cml03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cml00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BN424_1328 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cml03400]
    BN424_1328 (recD)
Enzymes [BR:cml01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     BN424_1328 (recD)
DNA repair and recombination proteins [BR:cml03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BN424_1328 (recD)
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_4 SH3_13 UvrD_C_2 AAA_11 Viral_helicase1 HHH_5 UvrD-helicase AAA_22 HHH_3 SLFN-g3_helicase T2SSE AAA_12 AAA_28 AAA_18 AAA_16 HHH_8 AAA_29 HHH Zeta_toxin IMS_HHH HTH_IclR
Other DBs
NCBI-ProteinID: CCO10770
UniProt: K8E3I4
Position
1364384..1366801
AA seq 805 aa
MVETDSNFKEKEIVVTGSFGQIQEEEIYRFYGKLTDHPKFGVQFTASRYSPERPTSAAGI
VNYLSSEKFPGIGKKTAENIVEALGDHAIDEIIANPAVLKMVAGLNQKKIDLLAETLQAG
DGMEKIIIGLNGYGFGSQLAFSIYQTYQEETLEIIQENPYQLVDDIENIGFKKADAIAEQ
LGFAADSPARIRAAILYALNELCLGRGDTYTLAEPLLEESLRVLEESRSVMIDPDFVANE
LIGLLEERRLVEHQEKLYLHSLYAAEWGISTSVKRLLERKKKINYDQHDIPKEIRKLEKR
LNISYGASQIEAIAEAVVSPLFILTGGPGTGKTTVLNGIVALFAELNGLSLDINDYHNAI
FPILLAAPTGRAAKRMNESTGLPSSTIHRLLGLNGREKNSDPVSERELEGGLLIVDEMSM
VDTWLANSLLKAVPTNMQVILVGDKDQLPSVGPGQVLHDLLASKVIPSMELNEIYRQEDG
SSIIPLAHEIKDGNLPADFTANKKDRSFFQCDTMQIENVIRQVVERAKTKGFTAQDIQVL
APMYRGPAGIDALNKMMQEIFNPNDTGKRKELKFNDKVYRIGDKVLQLVNNPESNVFNGD
MGEIVGISYAKETDDKVDEMTIQFDTNEVTYKRNEWNKITLAYCCSIHKSQGSEFKMVIL
PMVRNYNRMLRRDLLYTAITRSRDLLILCGEPQAFWTCVERSSDDRLTTLKDRLLEDDEL
EVSYQVIASPYQEKEQVLDVEPKALPEKKITEVKTKEVNLFDLEEESVEYQVEIKDPNRY
ILTIEMVKNNQIDPMIGMENVTPYN
NT seq 2418 nt   +upstreamnt  +downstreamnt
gtggtggaaacagacagcaattttaaagaaaaagagattgttgttactgggagtttcgga
caaattcaagaagaagaaatttatcgtttttatgggaagctgacggatcatcctaagttt
ggagtccagttcacggcaagtagatatagccctgaacgtccaacatcagctgctggaatt
gttaattatttgtctagtgaaaagtttccaggtattgggaaaaagacagctgaaaatatt
gttgaggctttaggtgatcatgcaattgatgaaattattgccaatccagccgttttaaaa
atggtagcaggtttaaatcaaaaaaaaattgatttattagctgaaacgttgcaagctggc
gatggtatggaaaagattataattggtttgaatggatacgggtttggtagtcaacttgct
ttttcaatttaccaaacttaccaagaagaaaccttagaaattattcaagaaaatccctat
caattagtagacgatattgaaaatatcggttttaaaaaagcagatgctattgcagaacaa
ctaggttttgcagcagattctccagcccgtattcgagcggctattttgtatgctctcaat
gaactttgtttaggacgaggagatacttatacgcttgcagaaccacttttagaagaatca
ttaagagtgttggaagaaagtcgttcggttatgattgatcctgattttgtagctaatgaa
ttaattggcttattagaagagcgacgtttagttgagcatcaagaaaaactttatttacac
tcgctatatgctgcagagtgggggatttcaacttcagtcaaacgtttattagaacgtaaa
aagaaaattaactatgatcaacatgatatcccaaaagaaattcgcaaattagaaaaacgt
ttaaatatttcttacggtgcttcacaaattgaagcaattgccgaagccgttgtttccccg
cttttcattttaactggtggtccaggaactggaaaaactacggtactaaatggaattgtt
gctttatttgctgaattaaatgggttgtcgttggatattaatgactaccacaatgctatt
tttccaattttgctagcggctccaacaggtcgagctgctaagcggatgaacgaatcaaca
ggcttaccaagtagtacaattcaccgattgctgggtttaaatgggcgtgaaaaaaactca
gacccagtttctgaacgtgaactggaaggcggtttgttaattgttgatgagatgtcaatg
gtagacacttggttggccaatagtttgctaaaagccgttccaacaaatatgcaagttatt
ttagttggggataaagatcaattgccatcagttggtccgggtcaagttttacatgattta
ctagcatctaaagtaatacccagcatggaattaaatgaaatctatcgtcaagaagatggt
tcatctattattccattggctcatgaaatcaaagatggcaatttaccggctgattttaca
gcgaataaaaaagatcgttctttctttcaatgtgacacgatgcaaattgaaaatgtgatt
agacaagttgttgaacgagcaaaaacaaaaggttttacggcacaagatattcaggtttta
gctccgatgtatcgtggtccagcaggtattgatgctttgaataaaatgatgcaagaaatt
ttcaatcctaatgatacaggtaaacgtaaagaattaaagttcaatgataaagtttatcga
attggagacaaagttctacagttagtgaataatcctgaatcaaatgtgtttaatggagat
atgggtgaaattgttggcattagttacgcgaaagaaacggatgataaagtcgatgaaatg
acgattcaatttgatacaaatgaagtgacctataaacggaacgaatggaataaaatcaca
ttggcttattgttgttctattcataaatcacaaggtagcgaatttaaaatggttatcttg
ccgatggtacgcaattacaatcgcatgttacgtcgtgatttactttatacagcaattact
cgtagtcgcgatttacttatcttatgtggcgaaccacaagctttttggacctgcgttgag
cgctcttctgatgaccgtttaacaacattgaaagatcgtttactagaagatgatgaatta
gaagtttcgtaccaagttattgcttcaccttatcaggaaaaagaacaagtactagacgtt
gaaccaaaagctctgcctgaaaaaaaaattacagaagttaagactaaagaagtgaactta
tttgatttagaagaagaaagcgtcgagtaccaagttgaaataaaagatccaaatcgttat
attctaacaattgaaatggttaaaaataatcagattgatccaatgattggaatggaaaat
gttactccatataactaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (23)   
   Pfam (23)   
All databases (33)   

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