KEGG   Cucumis melo (muskmelon): 103483351
Entry
103483351         CDS       T03195                                 
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80
  KO
K10885  ATP-dependent DNA helicase 2 subunit 2
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    103483351
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmo03400]
    103483351
DNA repair and recombination proteins [BR:cmo03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA-PK complex
     103483351
SSDB
Motif
Pfam: Ku Ku_PK_bind Ku_N Ku_C
Other DBs
NCBI-GeneID: 103483351
NCBI-ProteinID: XP_008438156
UniProt: A0A1S3AWC4
Position
6:1846153..1851351
AA seq 691 aa
MARNREILVLVLDVGPSMHFILPEVEKVCSMLVEKKLLYNKYDEVGIVLFGTEDTKNELT
EEVGGYQHVVVLQNMKVVDGDLVDVLKQIPRGTVSGDFLDAIIIGMDMLIKKFGETERGK
KRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGIKMDSVVVRGRFGQDANEKTMNEN
DLLLNIFSQKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGDLEISSVIKIKVWVYKKTS
EEKFPTLKRYSDKAPLTDKFATHEVKVDYEYKSAEEPSKVVPPEHRIKGYRYGPQVVPIS
TAEWDAVKFKTEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPGNKRSIVAVSALARAMKE
MDKVAIVRCVWRQGQGGVVVGVLTPNISEKDGIADSLFFNVLPFAEDVREFQFPSFSNLP
AFMQPSEEQQEAADDFVKMLDLAPDGREEILQPDFTPNPVLERFYRHLELKSKDPDAAVP
PLDGTLQKITEPDPDLFSQNKAVINTFHRRFELKENPKLKKSRRHYLREKASGSSDKEDN
EEISAQIVESVANMPMVKVEKVGDSTPLEDFESMMSRRDSPEWISKAINGMKSKIFDLIE
NSSDGDSYTKAIEYLRALRKGCIIEQEPKQFNDFLRHLRNFCPEKNLHTFCEFLASQQIS
LISKEEAADSEVADDEARRFWVKMEPKSEQV
NT seq 2076 nt   +upstreamnt  +downstreamnt
atggcgcgcaacagggaaatcttggtgctggtgttggatgttggtccatcaatgcacttt
attctccccgaggtcgaaaaagtttgttcaatgctagtagagaagaagctactctacaac
aagtacgatgaagtagggattgttctatttggaactgaagacactaaaaatgagctgaca
gaggaagttggtggatatcagcatgtggtggttttacagaacatgaaagtggttgatgga
gatcttgttgatgttctaaaacagatccctcgagggactgtttctggtgattttcttgat
gccataattataggaatggacatgctgataaagaaatttggagagacagaaagggggaag
aaacgcctatgtctcgtgacagatgctctattccctataaaagaaccttatgaaggaact
aaagaggatcaagttacgaccattgcgcagcagatgacaaaacatggcataaaaatggat
agtgttgttgtgagagggaggttcggtcaggatgcaaatgagaaaacaatgaatgaaaat
gaccttcttttaaacatattttcacagaaaacaaatgcaaaaatggtgtatgtggagagt
ccaacttcattattaggtgcaatccggactcgcagtatagcacctgtgacaattttcaga
ggcgaccttgagataagctccgttatcaagattaaggtatgggtttataagaaaacatca
gaagagaagtttcctactctgaaaagatattctgataaagcacctctaactgataaattt
gccacgcatgaagtcaaggtagattatgagtacaaaagtgccgaagaacctagtaaggta
gtgcctccagaacataggatcaaagggtataggtatggacctcaagtggttcctatatcg
accgctgaatgggatgcagtgaagttcaaaacagaaaagagcgtgaagctgctcggattt
acgaatgcctcaaatataatgaggcactactacatgaaagatgtcaatgtcttcattgcc
gaaccaggcaataaaagatccattgttgcagtttctgctctagcaagagcaatgaaggaa
atggacaaagtggcgatagtgcgatgtgtttggagacaaggacaggggggtgttgttgtg
ggtgtcttgacacccaatatatccgagaaggacggtattgccgattcgttattcttcaat
gtacttccctttgcggaggatgttcgggaattccagtttccatccttcagcaatttgcca
gcattcatgcagccaagtgaagaacagcaagaggcagcagatgactttgttaagatgctt
gatcttgcaccagatgggcgagaggaaattctacagccggatttcacaccaaatcctgtt
ctggagcgtttctaccgtcatctcgagttgaaatcaaaggatcctgatgctgctgtacct
ccacttgatggaactctccagaaaattaccgagccagatccggacttgttttctcaaaac
aaagctgttatcaacaccttccacagaagatttgaactcaaggagaacccaaagctaaag
aaatcgagaaggcattatttacgtgaaaaagcatcaggttcaagcgataaagaggacaac
gaagagatttctgctcaaattgttgagtctgttgccaatatgcctatggttaaagtcgaa
aaggttggagattcaactccacttgaagattttgaatctatgatgtctagaagagatagt
ccagaatggatcagtaaagcaatcaatggcatgaaaagcaaaatattcgatcttatcgag
aactcctctgatggtgatagctacacaaaagctatcgagtacttgcgtgcacttcgcaag
ggttgcattattgaacaagaaccaaagcaattcaacgattttctccgccatctccgtaac
ttttgccccgaaaaaaacctccataccttctgtgaattcctcgcatctcaacaaattagt
ttgatctccaaggaagaagctgctgacagtgaagtagctgatgatgaagctagaagattt
tgggttaaaatggagcctaaatcagagcaagtctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system