KEGG   Cucumis melo (muskmelon): 103484801
Entry
103484801         CDS       T03195                                 
Name
(RefSeq) small RNA degrading nuclease 1
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    103484801
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cmo03009]
    103484801
Ribosome biogenesis [BR:cmo03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    103484801
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 Rv2179c-like PTR HIP1_clath_bdg
Other DBs
NCBI-GeneID: 103484801
NCBI-ProteinID: XP_008440317
UniProt: A0A1S3B1K6
Position
8:complement(3817673..3822685)
AA seq 523 aa
MEDKIATAEKKVLVEMVRLTQKRGMRGSEGDWKEFLNSRDPKFGASMSDPSKRPNDLLIA
FLKTFNKEDDLMFLDKVLQCNEKRNFVKQVSQITPGNESPEQKLVRLTLEHPQYPLEYSF
PSYDKEWVVTKFSQKSKGPNSNLIYAIDCEMVLCEDGTENLVRVCMVDRDLQVKIDELVK
PRKAIKDYRTDITGISPGDLDGVSCSLADVQKSITKFLSHGRTILVGHSLNNDLQALKLD
HSRVIDTSFIFKYSNGSIYRRPSLSKLCKSVLGYDLRKEGAPHNCLDDAQAAMKLVLAKL
GSKADDTIAIADEDTPQVGMEKLLLHRIPINVPSEALARAIHGDFTIELKPPKKGQGGDI
YSALAIFKNPKEAQQAFEEIEGSADEDSSGRPQKLIRFQHSGSIVSIYVRKMGQKDFADK
FSSKKRDLEVIENIVMSKKQKTDNKMEIETISNSSKCCNHVEEVERLKQELKRKEDSTHC
CDHVNEVESLKEELRRKDYELSILRKTITIVKKDSKKKKGKKR
NT seq 1572 nt   +upstreamnt  +downstreamnt
atggaggacaagatcgctacagcagagaagaaggtgcttgttgagatggtgcggttgacc
caaaagcgaggaatgagaggtagtgaaggagactggaaggagtttcttaatagtcgtgac
cctaagttcggggctagcatgagtgacccgtctaagaggcccaatgatttgttgattgct
tttctcaagacatttaataaagaggatgatttgatgtttttggataaagtactccagtgt
aacgagaagcgcaattttgtgaagcaagtatcgcagataactccaggaaacgaatcaccc
gagcagaagctggtccgacttacccttgaacacccacagtacccattggaatattcattc
ccgtcatatgataaggaatgggttgttacaaaatttagccaaaagtctaaaggaccaaat
tcaaatttgatctatgccattgactgtgagatggttctctgtgaagatggaactgagaac
ttggtgagggtttgcatggtggatcgtgacttacaagtaaaaattgatgaacttgtgaaa
cctagaaaagctatcaaggactatagaactgatataactggaatttcccctggggatttg
gatggagtttcttgttctttggctgatgtacagaaatccattacaaaattcctttcacat
ggaagaactattttggtaggccacagtctgaacaatgatctgcaagcactgaaattagat
cactcgagggtgattgacacttcatttatcttcaagtattccaatggttctatctataga
aggccttctttgagtaagctgtgtaagtctgtcttgggctatgaccttcggaaggagggt
gctccacataattgtctggatgatgctcaggctgccatgaaacttgttcttgcgaaactg
gggagcaaagctgatgatacgattgctatagctgatgaggatacacctcaagttggtatg
gagaaactacttcttcatcggataccaatcaatgtaccaagtgaagcattggctcgggct
attcatggtgactttaccattgaacttaagccacctaagaaaggtcaagggggggatata
tactctgcacttgccattttcaagaatcccaaggaggcacagcaagcatttgaagagatt
gaaggtagcgcagatgaggactcatctggacggcctcaaaagctcatcagatttcaacat
tctggatccattgtcagtatctatgttcgcaaaatgggacaaaaggactttgcagacaaa
ttctcgtctaagaagagagatctggaggtgattgaaaacatagtcatgtccaaaaagcag
aagactgacaataaaatggaaattgagacaatttcaaactcaagtaaatgttgcaaccat
gtggaggaggttgaaagattgaagcaagaattgaaacgaaaggaggactcgactcactgt
tgtgatcacgtgaatgaggttgagagcctgaaggaagaattaagaaggaaggattatgaa
cttagtatcctgcgtaaaactatcaccattgtgaagaaggatagcaaaaagaaaaaagga
aagaagaggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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