KEGG   Cucumis melo (muskmelon): 103487708
Entry
103487708         CDS       T03195                                 
Name
(RefSeq) cullin-4
  KO
K10609  cullin 4
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03420  Nucleotide excision repair
cmo04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103487708
  09124 Replication and repair
   03420 Nucleotide excision repair
    103487708
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cmo04121]
    103487708
   03400 DNA repair and recombination proteins [BR:cmo03400]
    103487708
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cmo04147]
    103487708
Ubiquitin system [BR:cmo04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Cullin
     103487708
DNA repair and recombination proteins [BR:cmo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      103487708
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      103487708
Exosome [BR:cmo04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   103487708
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 103487708
NCBI-ProteinID: XP_008444359
UniProt: A0A1S3B9N9
Position
12:complement(22335568..22347700)
AA seq 829 aa
MSLPTKRSATATANANTNTAASSLLSSPSSSPTSTTPSSISSPPMKKTKSQPLDPNKNGL
HHHDDPDFDPSSMPLDDEDLKPPHHSSLIGASRSVATNLSRKKATPPQPAKKLVIKLLKA
KPTLPANFEEDTWAKLKSAICAIFLKQPNSCDLEKLYQAVNDLCLHKMGGNLYRRIEKEC
EVHISAALQSLVGQSPDLVVFLAYVEKCWQDFCDQMLMIRGIALYLDRTYVKQTPSVCSL
WDMGLQLFRKHLSLSSEVEHKTVTGLLRMIEKERLGEAINRTLLNHLLKMFTALGIYSES
FEKPFLEYTSEFYAAEGMKHMQQSDVSEYLKHAEGRLQAEQDRCLHYLDSSTRKPLIATT
ERQLLERHISAILDKGFTLLMDGNRMGDLLRMYTLISRVNALESLRQALSSYIRRTGQNI
VMDDEKDKDMVSSLLEFKASLDTIWEESFSKNEAFCNTIKDAFEHLINLRQNRPAELIAK
FLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDA
EKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPMGIEMSVHVLTT
GYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWHNSLGHCVLKAEFPKGKKELA
VSLFQTVVLMLFNDAEKLSFQDIRESTGIEDKELRRTLQSLACGKVRVLQKIPKGRDVED
NDSFVFNDGFTAPLYRLKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVL
SHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq 2490 nt   +upstreamnt  +downstreamnt
atgtctctccccaccaaacgctctgccaccgccaccgccaacgccaacaccaacaccgcc
gccagctcccttctctcttctccttcttcttcacccacttccaccaccccttcctctatc
tcttcccctcctatgaagaaaaccaaatcccaaccacttgaccccaacaaaaacggtctc
caccaccacgatgaccccgatttcgacccttcttccatgccccttgatgatgaagatctc
aaaccaccccatcactcctctctcattggcgctagccgctccgtcgctactaatttgtcc
cgtaagaaagccactcccccacagcctgctaagaaactcgttatcaagcttctcaaagca
aaaccaacactccctgctaatttcgaggaggatacatgggcaaagttgaaatcagccata
tgtgccatattcttgaagcaacctaattcttgtgatttggagaagctttatcaggctgtt
aacgatctttgcttgcacaaaatgggtggtaacctttatcggcgaatcgaaaaggagtgt
gaagtacacatatctgcagcattgcagtctttggttgggcaaagcccagatttggtggtt
ttcttggcatatgttgagaaatgctggcaagatttttgtgatcagatgttgatgattcgt
ggcattgccctgtatctggacaggacttatgtcaaacaaacaccaagtgtgtgctcatta
tgggacatggggttgcaacttttcagaaagcatttatctttatcttcagaggttgagcac
aaaactgttactggtctattaagaatgatcgagaaagaaaggctaggtgaagcaattaat
cggactctcctcaaccacctcttgaagatgtttaccgcactaggaatttactcagaaagc
tttgaaaagccattccttgaatacacttctgagttttatgctgctgaaggcatgaaacac
atgcagcagtcagatgtttcagaatatttaaagcatgcagagggaaggttgcaggcagag
caagatagatgtttgcactatcttgattcaagtacaagaaaaccattgatagcaaccaca
gaaagacaacttcttgaacgtcatatatctgcaatccttgataagggatttacattgctg
atggatggaaaccgtatgggagatcttctgagaatgtacacacttatttcaagagtcaat
gcccttgaatcattaagacaagcccttagctcatatatacgaagaactgggcaaaatata
gtcatggatgatgagaaggacaaagatatggtctcatcccttttagaattcaaggcttct
ctggatactatatgggaagaaagcttttccaagaatgaagctttttgcaatacaataaag
gatgcgtttgagcatcttattaatcttcgtcagaatcgtcctgctgaattgattgctaag
tttctggatgaaaagctccgtgctggaaataagggtacttctgaagaagaattggagggt
acactagacaaagtgttggttctgttcaggtttattcagggcaaggatgtgtttgaagcc
ttttacaagaaggatcttgcaaagaggctacttctaggaaagagtgcttcaattgatgca
gaaaagtctatgatttccaaactgaagacagagtgtggtagtcagtttacgaacaaactt
gaaggaatgtttaaggatattgaattgtctaaagagataaatgaatcgttcaagcaatca
tcccaagcgaggacaaagctccccatggggattgagatgagtgttcatgtcttgactact
gggtactggccaacttaccctcccatggatgttaggcttccccatgagttgaatgtctac
caggacattttcaaagagttctatttgagtaaatacagtgggagacgcttaatgtggcat
aattcattaggccactgtgtgctgaaagccgagttcccaaaaggtaaaaaggagttggca
gtttccctatttcagaccgtggtcttaatgcttttcaacgatgctgagaaacttagtttc
caagatattagagaatctactggaattgaggataaagaactcaggaggactttacagtca
cttgcctgtggaaaagttagagtactacaaaagataccaaagggcagagatgttgaggac
aatgattcatttgtgttcaatgatggatttactgctccactttaccgtcttaaggtaaat
gccattcagatgaaggaaacggtagaagagaataccagcactactgaaagagtctttcag
gaccgtcaatatcaggtggatgctgctattgttcgaataatgaaaacccgaaaagtgcta
agtcacactcttctgataactgagctcttccaacagttaaagtttccaataaagccagct
gatttgaagaagcggattgaaagtcttatcgatagagagtatctagaacgtgacaagaac
aaccctcagatatacaattacctcgcctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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