KEGG   Cucumis melo (muskmelon): 103490355
Entry
103490355         CDS       T03195                                 
Name
(RefSeq) coatomer subunit alpha-1
  KO
K05236  coatomer subunit alpha
Organism
cmo  Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cmo04131]
    103490355
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cmo04147]
    103490355
Membrane trafficking [BR:cmo04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    103490355
Exosome [BR:cmo04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   103490355
  Exosomal proteins of bladder cancer cells
   103490355
SSDB
Motif
Pfam: COPI_C Coatomer_WDAD WD40 ANAPC4_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 103490355
NCBI-ProteinID: XP_008448067
UniProt: A0A1S3BIU4
Position
1:17490859..17497094
AA seq 1217 aa
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKDDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSSVMFHAKQDLIISNSEDKSIRVWDVTKRTGVQTFRREHDRFWILAAHP
EMNLLAAGHDSGMIVFKLERERPAFVISGDSLLYTKDRFLRFYEFSTQRDTQVIPIRRPG
SISLNQSPRTISYSPTENAILICSDLEGGSYELYTIPKESIGRGDSVQDAKRGVGGSAVF
VARNRFAVLDKSNMQVLIKNIKNEVVKKSVLPIAADAIFYAGTGNLLCRSEDRVVLFDLQ
QRVVLGDLQTPFIKYVVWSNDMETVALLSKHVIIIASKKLVHQCTLHETIRVKSGAWDDN
GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSANTIFCLDRDGKNKTIVIDATEYM
FKLSLLKKKFDHVMSMIKNSQLCGQAMISYLQQKGFPEVALHFVKDERTRFNLALESGSI
QIAVASATALDEKDHWYKLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNIDKLSK
MLKIAEVKNDVMGQFHNALYLGDVRERVKILENVGHLPLAYITASVHGLHDVAERLAAEL
GDDVPALPEGKVPSLLMPPSPVMCGGDWPLLRVMKGIFEGGLDNVGRGVADEEEEAADGD
WGEELDMVEVDGLPNGDVTAILEDGEVAEENEEDGGWDLEDLELPPEAETPKASVSARSF
FVAPTPGMPVSQIWIQRSSLAAEHAAAGNFDTAMRLLNRQLGIKNFAPLKSMFLDLHGGS
HSHLRAFSSAPVITLAVERGWNESASPNVRGPPALIFNFSQLEEKLKAGYKATTSGKFTE
ALKLFLSIIHTIPLIVVESKREVDEVKELIIIVKEYILGLQMELKRREVKDNPIRQQELA
AYFTHCNLQLPHLRLALQNAMTVCFKAKNLATAGNFARRLLETNPVVENQAKAARQVLQA
SERNMTDAAKLNYDFRNPFVICGATHVPIYRGQKDVSCPYCSARFVPSQEGQLCTVCDLA
AVGADASGLLCSPSQIR
NT seq 3654 nt   +upstreamnt  +downstreamnt
atgctgacgaagtttgagacgaagagtaatagagtgaaggggttgagttttcatagtaag
aggccatggatcctggcgagtcttcacagtggtgtgatccagctatgggactaccgaatg
ggcactcttattgatagatttgacgaacatgatgggcctgttcggggtgtccattttcat
aagtctcagccgttgtttgtttccggaggggatgattacaaaattaaggtttggaactat
aagacacaccgatgtttgtttactcttcttgggcaccttgattatatccgcaccgtgcaa
tttcatcatgaatatccatggattgtgagtgccagtgatgaccaaactattcgaatatgg
aactggcagtctcgtacttgcatttctgtgttgaccggccacaatcattatgttatgtgt
gcttcattccaccctaaggatgaccttgttgtgtctgcctccctagatcagactgttcgt
gtttgggacataggtgccttgagaaagaagacagtgtcccctgcagatgacattttgcgg
ttaagtcaaatgaatacagatctttttggtggtgttgatgctgtggttaaatatgtattg
gaaggtcatgaccgtggtgtcaactgggcttctttccatccaactctgcccttgattgtc
tccggagccgatgatcggcaagtaaagttgtggcgaatgaatgacacaaaagcttgggaa
gtggacacattgaggggtcacatgaataatgtttcaagtgttatgttccatgctaaacag
gatttgatcatatccaattcagaggacaagagcatccgtgtgtgggatgtcacaaaacga
actggtgttcagacatttcgtcgtgagcatgaccgattctggattcttgctgctcatcct
gaaatgaacctcttggctgctggtcatgacagtggcatgattgtctttaagttggaaagg
gaacggccagcttttgttattagtggagattctctcttgtatactaaggatcggtttttg
cggttttatgagttttcaactcaaagggatactcaagtaattccaattcgacgtcctgga
tccattagcttgaatcagagccccaggacaatatcgtatagtcctacagaaaatgcaatt
cttatttgctcagatctggaaggtgggtcatatgaattatataccatacccaaggaaagc
attggtagaggcgatagcgtacaagatgcaaagagaggcgttggaggatcagctgtcttt
gttgctcgtaataggtttgctgtgttagataaaagtaacatgcaagtcttgatcaagaat
atcaagaatgaagttgttaaaaagagtgtcctccctattgctgcagacgcaatattctat
gcaggaacaggtaacttgttatgcagatctgaggacagagtggttttatttgatctccag
caaagagtcgttcttggtgacttacaaaccccatttataaagtatgttgtctggtccaat
gatatggaaactgttgccttgctcagcaaacatgtcattatcattgctagcaagaagctt
gtgcatcagtgcacacttcatgagacaatccgagttaaaagtggtgcatgggacgataat
ggtgttttcatttatacaactttaaatcacattaaatattgtctgcctaatggagatagt
gggataatcagaactcttgatgtcccaatatacatcacaaaggtttctgcgaatactatc
ttctgtttggatcgggatgggaaaaataaaaccatagttattgatgcaacagagtatatg
ttcaagctgtcccttcttaagaagaaatttgaccatgtaatgagcatgattaaaaactct
cagctttgtgggcaagcaatgatcagttatttgcaacagaagggtttccctgaagtagct
cttcattttgtgaaagatgagagaactcggtttaatttggctcttgagagtgggagcatt
caaattgcagttgcatcagcaactgctctcgatgagaaagaccactggtacaaattgggt
gttgaggcacttcgtcaaggcaatgcaggaattgtggaatatgcctatcagaggacaaaa
aactttgagaggttgtcttttctttatctcataactggtaacattgacaagctgtctaag
atgctcaaaattgctgaagttaaaaatgacgtgatgggtcaatttcataatgccttatat
ctgggtgatgttcgagaacgtgttaagatactggagaatgttggtcacttgccccttgct
tacattacagcttcagttcacggactgcatgatgttgctgaacgtcttgcagctgaatta
ggagacgatgttccagctttgccagaggggaaagtaccatctctcctgatgcccccttcc
cctgttatgtgcggtggcgattggcctcttctgagagttatgaaaggcatatttgaaggt
gggttagataatgttggcaggggtgtggccgatgaagaagaggaggctgctgatggtgat
tggggcgaggagctggacatggttgaagttgatggtttgccaaatggggatgttacagca
attctagaagatggtgaagtggcggaagaaaatgaagaagatggtggctgggaccttgaa
gacttggagcttccacctgaagcagaaactcctaaagcttccgtcagtgcacgttcattt
tttgtggctccaactcctggcatgcctgttagccaaatttggattcagaggtcgtctctt
gctgccgagcatgctgccgctggcaattttgatactgctatgcggttgctgaacaggcaa
cttggaataaagaattttgctcccttgaaatcaatgtttcttgatcttcatggtggcagc
cactcccatcttcgtgcattttcatctgctccagttataactctggcagtcgaacgagga
tggaacgagtctgcaagcccaaatgtaagaggaccccctgcactcatattcaatttctct
cagttggaagagaagctgaaagctggttacaaggccacaacctctgggaaattcactgaa
gctctgaaactcttccttagcattattcatacaataccattgatagtagtggaatcaaag
agagaagttgacgaggtgaaggagttaattattatagtcaaagagtatatattaggtttg
cagatggagctcaagaggagagaagttaaggacaatcctattcgccaacaggaacttgca
gcctattttactcactgcaatctgcagctacctcatttaagacttgccttgcagaacgca
atgactgtttgcttcaaggctaagaaccttgctaccgctggtaactttgccaggcgtctg
cttgaaaccaatcccgtcgttgagaaccaagcaaaggcagccaggcaagtgctgcaggct
tctgagaggaatatgacagatgctgccaaactcaactatgattttagaaatccctttgtg
atctgtggggctacacatgtgccaatttatcgaggacagaaagatgtctcgtgcccgtat
tgcagtgcccggtttgtgcccagccaggaaggtcagctttgtactgtttgtgatctcgct
gctgttggagcagatgcatctggactactctgctctccttcccagattcgatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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