KEGG   Cucumis melo (muskmelon): 103496327
Entry
103496327         CDS       T03195                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03020  RNA polymerase
cmo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103496327
  09124 Replication and repair
   03420 Nucleotide excision repair
    103496327
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmo03021]
    103496327
   03400 DNA repair and recombination proteins [BR:cmo03400]
    103496327
Transcription machinery [BR:cmo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     103496327
  RNA polymerase III system
   RNA polymerase III
     103496327
  RNA polymerase I system
   RNA polymerase I
     103496327
DNA repair and recombination proteins [BR:cmo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      103496327
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat
Other DBs
NCBI-GeneID: 103496327
NCBI-ProteinID: XP_008456369
UniProt: A0A1S3C2N2
Position
11:23684703..23687869
AA seq 207 aa
MVFPEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGENMKREDLVINKSK
RNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVFRAIFVVQLNLTPFARNKIAELSST
KVHLEVFQEAELMVNIKEHVLIPEHQSLTDEEKKTLLGRYTVKETQLPRMQVTDPIARYY
GLKRGQVVKIIRPSETAGRYVTYRYVV
NT seq 624 nt   +upstreamnt  +downstreamnt
atggtgttcccagaagaagaaatcaccaaactctttagagtccggaaaactgtgttgcag
atgttgaaagacagaggctattttgttggagatttcgagcttgatatgtctaaagcacaa
tttaagaataagtttggtgagaacatgaaaagagaagatctggttatcaataaatccaag
agaaataatagctctgatcagatatatgttttcttccctgaagagccgaaggtcggtata
aagatagtggaaacttatgtaggtcgtatgaaatcagagaatgttttcagagcaatattt
gttgttcaactgaatttgaccccctttgcccgtaataaaatcgccgaattatcgtctacc
aaagtccatttggaggttttccaggaagcagaattgatggttaacatcaaagagcatgtt
ctcattcccgagcaccagtcgctcacagatgaagagaagaaaacgttgttggggaggtat
accgtgaaagaaacacaattacctcgcatgcaagttactgatccaattgctagatattat
gggctgaagcgtggacaagtagtgaagatcatccgaccaagcgaaactgctggaagatat
gtgacttatagatatgttgtttga

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