KEGG   Cucumis melo (muskmelon): 103502380
Entry
103502380         CDS       T03195                                 
Name
(RefSeq) histone deacetylase 6
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03082  ATP-dependent chromatin remodeling
cmo03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    103502380
   03083 Polycomb repressive complex
    103502380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cmo03036]
    103502380
Enzymes [BR:cmo01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     103502380
Chromosome and associated proteins [BR:cmo03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     103502380
   HDAC complexes
    Sin3A-HDAC complex
     103502380
    BRAF-HDAC complex
     103502380
    REST complex
     103502380
    SHIP complex
     103502380
    MiDAC complex
     103502380
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     103502380
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    103502380
  Chromatin remodeling factors
   NuRD complex
    103502380
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 103502380
NCBI-ProteinID: XP_008464523
UniProt: A0A1S3CLN6
Position
2:complement(25468147..25471235)
AA seq 465 aa
MSDDIHGGASLPSGPDGRKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHR
RMEINRPYPAGTEDIRRFHSDDYVDFLASVSPETLSDHAFSRHLKRFNVGEDCPVFDGLF
GFCQASAGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYH
KRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGVGTGKNYALNVP
LNDGMDDDSFRGLFRPLIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRF
LRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYALHIEP
SNMENLNSPKDMEKIRNTLLEQLSRLPHAPSVPFQMTPSSEVPEEVEENIERRPKRRIWN
GEDYDSDSEENRKRPNISEGTGVNNLMRDVVDDMEEDKNMGHRCC
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgtccgatgacattcacggcggcgcttcacttccatcaggtcccgatggtcggaaacgc
cgtgtgacctacttctacgagcccacaattggcgattactattacggccaaggccatccg
atgaaacctcaccgtatccgcatggcccataatctcatcgttcactacggtcttcaccgt
cggatggagatcaaccggccataccctgctggtactgaggatattcggaggtttcactcc
gatgactatgtcgatttcctcgcctccgtcagcccggaaacgctgtcggatcacgctttc
tctcgccatctcaagcgctttaatgttggcgaggactgccctgtttttgatggcttattt
ggcttctgccaagcctctgctggaggctccattggtgctgccgtcaagctcaatcgcggc
gatgctgatattgctatcaattgggctggtggacttcatcatgctaagaagtctgaggcc
tccggtttctgttacgtcaatgatattgtattgggtattcttgagctgctgaagtatcac
aagcgtgtactatatattgacattgatgttcatcatggtgatggcgtggaggaggcattt
tacactactgacagagtaatgacggtttcttttcataaatttggggatttctttccaggg
actgggcacattaaggatgttggagtagggactggtaaaaactatgcccttaatgtcccc
ttaaatgatggaatggacgatgacagttttcgtggtctgtttaggccacttattcaaaaa
gttatggaggtgtatcagccagatgcagtagtactccagtgtggagctgattcattgtct
ggtgataggttggggtgcttcaacctatctgtaaagggccatgcagattgtcttcgtttc
ttgagatcatttaatgttcctttaatggtattaggtggaggaggatacacaatccgcaat
gttgctcgctgctggtgttatgagacagcagttgctgttggagttgaaccagacaataaa
ttgccttacaacgagtattttgagtattttggacctgattacgcgcttcacatagaacca
tcaaacatggagaatctaaattcacctaaagatatggaaaagataaggaacaccctgctg
gagcaactctctagactcccacatgcacccagtgtacctttccagatgactccctcgtct
gaagttccggaagaggttgaagagaacattgaacgtagacccaaacgccgtatctggaat
ggtgaggattatgattctgattctgaagaaaaccgaaagcgaccaaatattagtgaagga
actggtgtaaataatcttatgagggacgtagtagatgacatggaggaagataaaaacatg
ggccatcgatgttgttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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