KEGG   Cucurbita moschata (crookneck pumpkin): 111442431
Entry
111442431         CDS       T05248                                 
Name
(RefSeq) protein transport protein SEC13 homolog B-like
  KO
K14004  protein transport protein SEC13
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03013  Nucleocytoplasmic transport
cmos04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    111442431
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111442431
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmos03019]
    111442431
   04131 Membrane trafficking [BR:cmos04131]
    111442431
Messenger RNA biogenesis [BR:cmos03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     111442431
Membrane trafficking [BR:cmos04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    111442431
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    111442431
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    111442431
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 111442431
NCBI-ProteinID: XP_022935623
UniProt: A0A6J1FB15
Position
Unknown
AA seq 302 aa
MSEQKIETGHQDMVHDVQMDYFGKRIATASSDFTIKIISVSKNSASQLLATLNGHRGPVW
QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWLQAHVFNAHKSSVNSIAWAPHELGLCL
ACGSSDGDISVFIARSDGGWDSNQIEQAHPVGVTSVSWGPITAPGSLVGSGSVDPVWKLA
SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII
WSVTKDGGKWEGTVMNDFKTPIWKVSWSLTGHLLAVADGNNHFTLWKEAVDGKWQQVTTV
EP
NT seq 909 nt   +upstreamnt  +downstreamnt
atgtctgagcagaagattgaaactggccatcaagatatggtccatgatgtacaaatggac
tactttggcaaacgcatagcaacagcttcttctgattttaccattaaaattattagcgtt
agcaaaaactctgcttcacaactcttagctacattgaatggtcatagaggcccagtttgg
caagttgcttgggcgcacccaaagtttggttcaatggtagcttccagctcttacgatggt
caagtgataatctggaaggaaggcaatcaaaatcaatggttgcaggctcatgtttttaat
gcacataagtcttcggtgaactccattgcctgggcaccccatgaacttggcctctgcttg
gcctgtggatcatctgatggagatatatcagtctttattgctagatctgatggtggctgg
gacagtaatcaaatcgaacaagcccaccctgtcggagtaacctcagtttcatggggccct
attacggctccaggttccttagttggttcgggttcggtggaccctgtttggaagctagct
tctgggggctttgatagtacagtgaaggtgtggacactaaaagatggaagctggaggaga
gattcttcccctgcccttcagatgcacacagattgggtgagggatgtggcttggtcgcca
aacctagggcttcaaaaatccaccattgcaagtggttcccaggatgggacagtgattatt
tggtctgttacaaaggatggagggaaatgggagggcacagtgatgaatgattttaagact
ccaatttggaaggtttcatggtcattgactggacacttgttggctgttgctgatgggaat
aaccattttactttgtggaaagaagcggtcgatggaaaatggcagcaagtaactacagtt
gagccttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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