KEGG   Cucurbita moschata (crookneck pumpkin): 111444684
Entry
111444684         CDS       T05248                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cmos04131]
    111444684
   04121 Ubiquitin system [BR:cmos04121]
    111444684
Enzymes [BR:cmos01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     111444684
Membrane trafficking [BR:cmos04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    111444684
Ubiquitin system [BR:cmos04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    111444684
SSDB
Motif
Pfam: zf-RING_2 zinc_ribbon_9 zf-C3HC4_2 zf-rbx1 zf-RING_11 zf-C3HC4 zf-RING_5 zf-ANAPC11 zf-C3HC4_3 zf-RING_UBOX zf-RING_16 Zn-ribbon_8 zf-RING_10 zf-Nse
Other DBs
NCBI-GeneID: 111444684
NCBI-ProteinID: XP_022938450
UniProt: A0A6J1FJU6
Position
Unknown
AA seq 312 aa
MFSTASLAAVDKPFFCHQCDRAVTVIVSLSSDPLCPFCNEGFLEEYENSNSNSNVNLDRG
TLLLPDPFRGFNPLVVSSSTVVDLQNPGLFSRTLSLASQSNSSVQPEPYDPFVFLQNHLR
GIFDSGADVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKS
AIEKLPTVTVTEDLLNSEMNQCAVCIDGFEKDTKVKQMPCKHVFHDYCILPWLELHNSCP
VCRFELPTDDSDYENRTRGSQVQANESSGEESGSGNRGSNSGRVERRFRVPLWWPFGGRN
DGSDSGDGNVSE
NT seq 939 nt   +upstreamnt  +downstreamnt
atgttctccaccgccagtctcgccgccgtcgacaagcctttcttctgccaccagtgtgat
cgcgccgttactgttattgtatccctttcatcggatcctctgtgtccgttttgtaatgag
gggtttcttgaagagtacgagaattccaattccaactcgaatgtcaatcttgatcgcgga
acacttctccttcccgatcctttccgtggttttaatcctcttgttgtttcctcttcgacc
gttgttgatcttcaaaaccctggtttattttcaagaactttaagtttggcttcccaatcc
aattcgtcagttcagcctgagccgtatgacccctttgtttttcttcagaatcatttacgg
ggtatcttcgatagtggtgcggatgttgtgtttgaaattccgcgccatgcttcccactct
ggcttttcaatgcctcaaaatgttggcgattacttcattggaccaggccttgagcagcta
attcaattactggctgacaatgatccgaaccgatatggaactccgccggcgtctaaatcg
gcgattgagaagcttccgactgtgactgttaccgaggatcttctgaattcggaaatgaac
cagtgtgccgtctgcattgatgggtttgaaaaagatactaaggttaagcagatgccctgc
aagcatgtatttcacgattattgtatattgccttggcttgaattgcataattcatgccct
gtttgccggttcgagttgcctacagatgattctgattacgagaatcgaactcgtggaagc
caggtgcaggcgaatgaatcttccggagaagaatcagggtcaggaaacagaggaagcaat
agtgggcgtgttgagaggaggtttagagtgccgctatggtggccgtttggggggcggaac
gatgggagtgactccggcgatgggaatgtcagcgaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (27)   

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