KEGG T01592: Cycma

Cyclobacterium marinum: Cycma_3404

Entry

Cycma_3404 CDS T01592

Definition

glycoside hydrolase

Orthology

K12373

hexosaminidase [EC:3.2.1.52]

Organism

cmr Cyclobacterium marinum

Pathway

cmr00511	Other glycan degradation
cmr00520	Amino sugar and nucleotide sugar metabolism
cmr01100	Metabolic pathways
cmr01110	Biosynthesis of secondary metabolites

Class

Metabolism; Carbohydrate metabolism; Amino sugar and nucleotide sugar metabolism [PATH:cmr00520]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:cmr00511]

SSDB

Motif

Pfam:

Glyco_hydro_20 Glyco_hydro_20b Glycohydro_20b2 DNA_pol3_beta

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

4001821..4003401

AA seq 526 aa
MYLAKHFLLSFLFALFSLDFTVAQQQPEIIPIPTTYLLNQGEFQWDNKVGLVLENFPNQG
NYLQQEALRLLNLPLQEIESVSKTILIRKVNDLKEGYTLDIQQNSVTIEAADETGAFYGV
ISLLQLAHASKEKNGKIILPNWKIQDSPKYEWRGIMLDESRYFFGMEKVKQLLDHMAYYK
LNTFHWHLTDAPGWRIEIKNFPKLTTVGGIGNQSEPNAPAAYYTQEEIKEIVRYARERMI
RVIPEIDMPGHATAANRAYPEHSGGGSEKYPDFTFHPAKETTYAYLSQILHEVDALFPSN
MMHLGGDEVSFGNQMWPKDPDVLRLMENERLTDMKDVEDYFFERMADTLFRFSNKVLAWD
EMASANLPKDKTIIFWWRHDKKEQLSLSLKNGYPTVVCPRIPFYFDFLQQEDHKYGRKWA
GAYAPLEAVYNFDMDAFGIKKEDENLILGIQANLWTETVPNEDRFDFLMYPRIAALAEVV
WSQNENQSYPQFMERLEVHLDKYKAEKLYYYNPFDPDHHPEPVYEP

NT seq 1581 nt +upstreamnt +downstreamnt
atgtatttagctaagcattttctattatcatttttatttgcccttttttctctagatttc
acggtcgctcagcaacagcctgaaattattcctattccgaccacctatctcctaaaccaa
ggtgaatttcaatgggataacaaagtgggacttgttcttgaaaatttccctaatcaagga
aattatttgcaacaagaggcattaagattattgaatcttcctcttcaggaaattgaatct
gtttcaaaaaccatcctaataagaaaggtaaatgacctgaaggaaggctatacattggac
attcagcagaatagcgtaaccatagaagctgcggatgaaacgggagccttttatggagta
atttctttgcttcaactcgcacatgcttccaaagaaaaaaatggaaaaattattcttcca
aactggaaaattcaggatagtccaaagtatgaatggcgagggatcatgttggatgagtct
aggtacttttttggcatggaaaaggtgaagcagttacttgatcatatggcttattataaa
ttaaatacatttcattggcatttgacggatgctcccggatggcggattgaaattaaaaat
ttccccaaattaacaacagtgggaggaattggtaatcaatctgagccgaatgctcctgca
gcttattatacccaagaggaaattaaagaaatcgttaggtatgcccgtgaacgaatgatt
agggtgattcctgaaattgatatgcccggacatgccacagctgccaatagggcatatccg
gaacatagtggcggtggatcagaaaaatatccggacttcacctttcaccctgccaaagag
actacttatgcttatttatcccaaattttgcatgaggtggatgcattatttcccagcaat
atgatgcatctgggaggggatgaagtaagttttggcaatcagatgtggccaaaagatccg
gatgttctgcgattgatggaaaatgaaagattgacggacatgaaagatgttgaggactat
ttctttgaaaggatggctgacactctttttcgttttagcaataaagtgttggcctgggat
gaaatggcttccgcaaatttgcctaaagacaaaacaattatcttttggtggaggcatgat
aaaaaggaacagctaagcctttctctcaaaaatggttacccaacagtagtctgcccaagg
atccctttttactttgactttcttcagcaagaagaccataagtacggaagaaagtgggca
ggtgcttatgctccattagaagctgtatataattttgatatggatgcttttggcataaaa
aaagaagatgaaaaccttattttaggcattcaggctaacctttggacagaaactgtgcct
aatgaagacaggtttgattttttaatgtatccaagaatagccgctttggcagaagtggtt
tggtcgcaaaatgaaaatcaatcttatcctcaatttatggaaagactggaagtacatttg
gataagtacaaagctgaaaaattatattattacaatccttttgatcctgatcatcatcct
gaacctgtttatgaaccctaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-CMR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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