KEGG T01592: Cycma

Cyclobacterium marinum: Cycma_5097

Entry

Cycma_5097 CDS T01592

Definition

glycoside hydrolase

Orthology

K12373

hexosaminidase [EC:3.2.1.52]

Organism

cmr Cyclobacterium marinum

Pathway

cmr00511	Other glycan degradation
cmr00520	Amino sugar and nucleotide sugar metabolism
cmr01100	Metabolic pathways
cmr01110	Biosynthesis of secondary metabolites

Class

Metabolism; Carbohydrate metabolism; Amino sugar and nucleotide sugar metabolism [PATH:cmr00520]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:cmr00511]

SSDB

Motif

Pfam:

Glyco_hydro_20 Glyco_hydro_20b CHB_HEX_C_1 Fn3_assoc CHB_HEX_C Glycohydro_20b2

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

6215459..6217360

AA seq 633 aa
MNKVLTLACLLFFLNAANLKAQNLNIIPLPESIEMGEGHLVLKEGSVIAAKTESSRKSAA
IFNEMLEAKTGLNLLIQIAPQRSDALVVLEEIQDAQNEEGYSLNIDGNKIHIKGSSKGIF
YGLQSLYQLVEMNGGQAIVPQLVINDAPAFGYRGIMLDVSRHFIGTDQVKKILDLMAQLK
LNTLHWHLTDDQGWRLEIKKYPKLTQVSAWRDSTIIGQYYDFKPFIYDGKPHGGYYTQEE
AKEIVKYAADRKITVIPEIELPGHSSAVLAAYPELGSFDSFQGIGTGTIAAVNENGKKYD
NDINQEVPGFWGVHYNIYGPTPKAFAFLEDVLSEVMEIFPSEYIHIGGDEVPKDHWKTSE
IAQKVIKKEKLADEHELQSHFIQQIEMFLNKNNRKLIGWDEILEGGLAPNATVMSWRGEK
GGIQAAKMGHDVIMTPNSHMYFDHYQAEDKTTEPLAIGGFLPLEKVYSYSPIPSELNEEE
SKHVLGVQANLWTEYIPSNNKLEYFLFPRAFALAEVAWKKNENKNYESFSLERLPERLRQ
LEEDNVFFRIPEAKVEFSKDEKSGRYLVEINPLIANATVYYTFDGHKADQTALLYTGPVL
APIAGKGQDPITIHYVTISPAGRSSNEFSVTLE

NT seq 1902 nt +upstreamnt +downstreamnt
atgaataaagtcctaaccttagcctgccttttattctttttaaatgcagctaacctaaaa
gcccaaaacctaaatatcattccattacccgagtccattgaaatgggagaaggccatttg
gtcttaaaagagggaagtgtaattgcggccaaaacggaaagcagtagaaaatccgctgct
attttcaatgaaatgttggaagccaaaacaggcttgaatctacttattcaaattgctcct
caaagaagtgatgccttagttgttctagaagaaattcaagacgctcaaaatgaagaagga
tactctttaaatattgatggaaacaaaattcatataaaaggatcatcaaaaggtatcttc
tatggattgcaatccttgtaccagttggttgaaatgaatggaggacaagccatcgttcct
caattagtaatcaatgatgctccggcgtttgggtacagaggtattatgcttgatgtttca
cgtcacttcattggcactgatcaggttaaaaaaatacttgatttaatggcccaattaaaa
ttaaacaccttacactggcacctaacggatgatcaaggttggagattagagataaaaaaa
tatccaaaacttacacaggtcagtgcttggagagattccaccatcattggacagtactac
gatttcaaaccatttatttacgacggaaagcctcatggtgggtattatacccaagaagaa
gccaaggaaatagttaagtatgctgcagacagaaaaattacagtaattcctgaaatagag
cttccaggccacagttcggcagtattggctgcttacccggaactaggaagttttgattct
tttcaaggtatcggaacaggtacaattgccgcagtaaatgaaaatggaaaaaaatacgat
aatgatatcaaccaagaagtcccaggcttctggggagttcattataatatttatggccct
acgccaaaagcttttgcatttttagaggatgtgttgtcggaggtgatggaaattttccca
agtgagtacatccatattggaggagatgaagtccctaaagatcattggaaaacctcagaa
atagcacaaaaagttatcaaaaaagaaaaattagctgatgaacatgaattacaaagccat
tttattcaacagattgaaatgtttcttaacaaaaacaacaggaagctgataggatgggat
gagatcctcgaaggtggtttagctccaaatgccacggtaatgagttggagaggagaaaaa
ggaggaattcaagcagctaaaatgggccatgatgtaatcatgacacccaatagccatatg
tattttgaccattaccaagcagaagacaaaacaacagaacctttggctataggaggtttt
cttcctcttgaaaaagtgtacagttactctcctattcctagtgaattaaatgaggaagaa
tctaaacatgttctgggagtacaggccaatttatggaccgaatacatcccttctaataac
aaactggagtacttcctatttccaagggcttttgccttggctgaagtggcttggaaaaag
aatgaaaataaaaattatgaatccttcagccttgaaagattacctgaaaggttacgtcaa
ttggaagaagacaacgtgttttttagaattccagaggctaaagtagaatttagtaaagat
gaaaaaagtggaaggtatttggttgaaatcaatcctttaatagctaatgcaactgtttac
tatacctttgatggacacaaagccgaccaaacagcattactttacacaggaccggtattg
gcaccaattgcaggaaaagggcaagatccaattaccatccattatgttaccatcagcccg
gctggaagaagtagtaatgaattcagtgtgaccctagagtaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-CMR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (22)   

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