KEGG   Clavibacter michiganensis subsp. sepedonicus: CMS_0891Help
Entry
CMS_0891          CDS       T00678                                 

Gene name
rafA
Definition
alpha-galactosidase (EC:3.2.1.22)
Orthology
K07407  
alpha-galactosidase [EC:3.2.1.22]
Organism
cms  Clavibacter michiganensis subsp. sepedonicus
Pathway
Galactose metabolism
Glycerolipid metabolism
Sphingolipid metabolism
Brite
KEGG Orthology (KO) [BR:cms00001]
 Metabolism
  Carbohydrate metabolism
   00052 Galactose metabolism
    CMS_0891 (rafA)
  Lipid metabolism
   00561 Glycerolipid metabolism
    CMS_0891 (rafA)
   00600 Sphingolipid metabolism
    CMS_0891 (rafA)
Enzymes [BR:cms01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.22  alpha-galactosidase
     CMS_0891 (rafA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(932087..934270)
Genome map
AA seq 727 aa AA seqDB search
MPDTAVPSALLHLRASGVSLVLDLTEGRLPAVVHWGADLGDTTPADLETMVRADLAPFAG
SVADDPIRLAILPEAHTSWTGKPGLEGHRDGADWSPLFRVTSATVDGDPLPVGVDGRPGS
ASTGPALVHVDAVDEVAGLGLALDVELLASGLVRKRAEATNLGDTTYDLGGVTLALPLPP
EAREILDFAGRWGLERTPQRRELVVGIHEREGRKGRTGPDAATLLSVGTPGFGFRHGDVR
GVHVAFSGNHRHYAERLSTGRQVIGGGELLLPGEVRLAAGESYASPWVYAAFGHGLDDQA
ARFHRHLRARETHPRRDRPMTINVWEAVYFDHDLARLTDLADRAAALGVERYVLDDGWFR
HRRDDHAGLGDWYLDEGVWPDGLGPIIDHVTGLGMEFGLWFEPEMVNEDSDLARAYPEWI
MQTGGRLPVRARQQQVLDLAIPEAYSYVLERMTAILAENDIAYIKWDHNRDLVDAGISPR
GQAGVHLQTLAAYRLMDELRARFPGLEIESCSSGGARVDLGVLERTDRVWVSDCIDPLDR
QTMMRWTMQLLPPELLGSHIASGVSHTTGRAHRLAFRAGSALYGHLGIEWDLAQATDEEN
ADLAAWIALYKEERALMHTGTVVRADESDPTLLVYGAVASSSDAALFFLASVGRSEVSPR
GRFLLPGLDPARRYRVEPVRVDTPEPGFTAPAWWDGVELTGQALAASGLHAPGMLPESIA
ILRVTAV
NT seq 2184 nt NT seq  +upstreamnt  +downstreamnt
atgcccgacaccgccgtcccctccgccctcctccacctccgggcatccggcgtctcgctc
gtgctcgacctcacggagggccgcctcccggccgtcgtgcactggggcgccgacctcggc
gacaccaccccggccgacctcgagaccatggtgcgcgcggacctcgcgccgttcgcgggc
agcgtcgccgacgatcccatccgcctcgcgatcctgcccgaggcgcacacctcgtggacg
ggcaagcccggcctcgagggccaccgcgacggcgccgactggtcgccgctcttccgcgtc
acctcggccaccgtcgacggcgatccgctccccgtcggcgtcgacgggcgcccgggatcc
gcgtccaccggccccgcgctcgtgcacgtcgacgcggtcgacgaggtcgcggggctcggc
ctcgctctcgacgtcgagctgctggcgtccggcctcgtccgcaagcgcgcggaggccacg
aacctcggcgacacgacctatgacctcggcggcgtcacgctcgcgctgccgctgccgccc
gaggcccgcgagatcctcgacttcgccggacgctggggcctcgagcgcacgccgcagcgc
cgggagctggtggtggggatccacgagcgcgagggccgcaagggccgcaccggacccgac
gccgcgaccctgctgtccgtcggcacgcccggcttcggcttccgccacggcgacgtgcgc
ggcgtgcacgtcgcgttcagcggcaaccaccggcactacgccgagcgcctctccaccggc
cggcaggtgatcggcggcggcgagctgctgctccccggcgaggtgcggctggccgcgggc
gagtcgtacgcgagcccgtgggtctacgcggcgttcggccacggcctcgacgaccaggcc
gcccgcttccaccgccacctgcgcgcccgcgagacgcacccgcgccgcgaccggcccatg
accatcaacgtgtgggaggccgtctacttcgaccacgacctcgcgcgcctgaccgacctc
gcggatcgcgcggcggccctcggcgtggagcgctacgtgctcgacgacggctggttccgc
caccgccgcgacgaccacgcgggcctcggcgactggtacctcgacgagggcgtctggccc
gacggcctcggcccgatcatcgaccacgtcacgggcctcggcatggagttcggcctgtgg
ttcgagcccgagatggtgaacgaggactccgacctcgcgcgcgcttaccccgagtggatc
atgcagaccggcggccgcctccccgtgcgcgcccgccagcagcaggtgctcgacctcgcg
atccccgaggcgtactcctacgtgctcgagcggatgaccgcgatcctcgccgagaacgac
atcgcctacatcaagtgggaccacaaccgcgacctcgtcgacgccggcatctccccgcgc
ggccaggcgggcgtgcacctgcagacgctcgcggcgtaccgcctcatggacgagctgcgg
gcgcgcttccccggcctcgagatcgagtcgtgctcctccggcggagcccgcgtcgacctc
ggcgtgctcgagcgcaccgaccgcgtgtgggtctccgactgcatcgaccccctcgaccgc
cagacgatgatgcgctggaccatgcagctcctcccgcccgagctcctcggctcccacatc
gcgtccggcgtcagccacaccaccggccgcgcgcaccgcctcgccttccgcgcgggctcg
gcgctgtacggccacctcggcatcgagtgggacctcgcgcaggccaccgacgaggagaac
gccgacctcgccgcgtggatcgccctctacaaggaggagcgcgcgctgatgcacacgggc
acggtcgtccgcgccgacgagagcgacccgacgctcctcgtctacggcgcggtcgcgtcg
tcgtccgacgcggcgctgttcttcctcgcgtcggtcggccgctccgaggtctccccgcgc
ggccgcttcctgctgccgggcctcgatcccgcgcgccgctaccgcgtggagcccgtgcgc
gtggacacccccgaaccgggcttcaccgcgcccgcctggtgggacggcgtcgagctgacg
ggccaggcgctcgcggcctccggcctgcacgccccggggatgctgcccgagtcgatcgcg
atcctgcgggtgacggcggtctga

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