KEGG T00678: CMS

Clavibacter michiganensis subsp. sepedonicus: CMS_1112

Entry

CMS_1112 CDS T00678

Gene name

lacZ2

Definition

beta-galactosidase (EC:3.2.1.23)

Orthology

K01190

beta-galactosidase [EC:3.2.1.23]

Organism

cms Clavibacter michiganensis subsp. sepedonicus

Pathway

cms00052	Galactose metabolism
cms00511	Other glycan degradation
cms00600	Sphingolipid metabolism
cms01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:cms00052]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:cms00600]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:cms00511]

SSDB

Motif

Pfam:

Glyco_hydro_2_C Bgal_small_N Glyco_hydro_2_N Glyco_hydro_2 Bac_rhamnosid_N Glyco_hydro_72

Other DBs

NCBI-GI:

170781524

NCBI-GeneID:

6159104

UniProt:

B0RGH3

Position

complement(1165743..1168796)

AA seq 1017 aa
MTHALPYYEDFAPTSGAARRPRSCLHSDAPRIVLNGDWRFRLSPTPRGLSDEMADPAFDD
SGWDEIPVPSHWVLGQDGRYGLPAYTNVQYPFPVEPPFVPDENPTGDYRVEIEVPTDWQS
LERVVLRFEGVESAFKVWLNGDEVGTAMGSRLSHEFDVTASLRPGSNVLAVRVHQWSIAS
YLEDQDQWWMPGIFRDVTLLGRPIGGIDDAWTRAEYDHETGAGTVHVEVDAEPSAFPVTF
EVEDLGIHVTWDTPADVAPVHVDRVEPWSAESPTQYQGFLRTNVEALSIRLGFRTVRIEG
DRFLVNGRRVVFHGVNRHEAHPERGRVFDEEHARADMLLMKQHNVNAIRTSHYPPHPRVL
DLADELGFWVIDECDLETHGFEFGGWVGNPSDDPRFAEAYLDRIERTVERDKNHPSIVMW
SLGNEAGTGRNLAAMSAWVHRRDPGRPVHYEGDYTGEYTDVYSRMYSNLQETESIGSDVI
PGDLLGCTPGEGMRQRTKPFILCEYVHAMGNGPGQIAEYEDLVLRYPRLHGGFVWEWRDH
GILTETADGEAFYAYGGDFGEVVHDGNFVMDGMVLPDDTPTPGLAEYKAVVQPIAFGLER
EGGSASLVVENRYHSVSTALASLVWVLAVDGDDIATGVLDAEPVAAGETVRIPLPADALD
AGDLRADGAEVWLTVQAILRDDEPWAEAGHVVAVQQFDLTPAPRPAVLARWVDADEDVIP
DAGATRLTLGDGEFDLATGRLVRLGALEVDGPRLELWRAPTDNDRSDSSGSYELADPRLT
FGKGVPGPSSEARWRQAGLDRLTHRVRSVKVGSGSLTVVVRTSAAQSFDSVDTTYCWTEG
ADGDLGLRVDIVPSAGWAISWPRVGILFDLPASVTNAEWFGTGPFESYPDSRRAALVGRF
SSLVDDLGAVYSIPQETGHRSDLRELELGTFDGEHGIVIQARPDTAGRRPGFTASRHTPQ
ELDRAAHPHELPASEAVHLYIDAAQHGLGSRACGLDVLPEHQLWPSARTLELTIRSR

NT seq 3054 nt +upstreamnt +downstreamnt
atgacgcacgccctcccctactacgaggacttcgcccccacgtcgggcgcggcccgacgt
ccccggtcctgcctgcactcggatgccccgcgcatcgtgctgaacggcgactggcggttc
cgcctctcccccaccccgcgcggcctctccgacgagatggccgaccccgcgttcgacgac
tccggctgggacgagatccccgtgccgagccactgggtgctcggacaggacggccgctac
ggcctccccgcctacacgaacgtgcagtacccgttccccgtcgagccgcccttcgtgccg
gacgagaaccccacgggcgactaccgcgtcgagatcgaggtgcccacggactggcagtcg
ctcgagcgcgtcgtgctccgcttcgagggcgtcgagtcggccttcaaggtgtggctgaac
ggcgacgaggtcggcaccgcgatgggatcccgcctctcgcacgagttcgacgtcaccgcg
tcgctgcggcccggatccaacgtgctcgccgtgcgcgtgcaccagtggtcgatcgccagc
tacctcgaggaccaggaccagtggtggatgcccggcatcttccgcgacgtcaccctcctc
ggccgcccgatcggcggcatcgacgacgcgtggacccgcgccgagtacgaccacgagacg
ggcgcgggcaccgtgcacgtcgaggtcgacgcggagccgtccgcgttccccgtcacgttc
gaggtggaggacctcgggatccacgtcacctgggacaccccggccgacgtcgcgcccgtg
cacgtggaccgcgtcgagccgtggagcgccgagagccccacgcagtaccagggcttcctc
cgcaccaacgtcgaggcgctctccatccgcctcggcttccgcaccgtgcgcatcgagggc
gaccggttcctggtcaacggccgccgcgtggtcttccacggcgtcaaccggcacgaggcg
catcccgagcgcggccgcgtcttcgacgaggagcacgcgcgcgccgacatgctgctgatg
aagcagcacaacgtcaacgcgatccgcacgagccactacccgccgcacccgcgtgtcctc
gacctcgccgacgagctcggcttctgggtgatcgacgagtgcgacctcgagacccacggc
ttcgagttcggcggctgggtcggcaacccgagcgacgacccgcgcttcgcggaggcgtac
ctcgaccggatcgagcgcaccgtcgagcgcgacaagaaccacccctccatcgtgatgtgg
tcgctcggcaacgaggcgggcaccggccgcaacctcgccgccatgtcggcgtgggtccac
cgccgcgacccgggccggcccgtgcactacgagggcgactacacgggcgagtacacggac
gtctactcgcgcatgtactcgaacctgcaggagaccgagtccatcggcagcgacgtcatc
ccgggcgacctgctcggttgcacgcccggcgagggcatgcgccagcgcaccaagcccttc
atcctgtgcgagtacgtccacgccatgggcaacggccccggccagatcgccgagtacgag
gacctcgtgctccgctacccgcgcctccacggcggcttcgtgtgggagtggcgcgaccac
ggcatcctcaccgagaccgcggacggcgaggcgttctacgcctacggcggcgacttcggc
gaggtcgtccacgacggcaacttcgtgatggacggcatggtcctgcccgacgacaccccc
acgcccggcctagccgagtacaaggccgtcgtgcagcccatcgcgttcgggctcgagcgg
gagggcggatccgcgtccctcgtcgtcgagaaccggtaccactccgtctccaccgcgctc
gcgagcctcgtctgggtgctcgcggtcgacggcgacgacatcgcgaccggcgtcctcgac
gccgagcccgtcgccgccggggagaccgtccgcatcccgctgcccgccgacgccctcgac
gcgggcgacctgcgcgccgacggcgccgaggtgtggctgacggtgcaggcgatcctccgc
gacgacgagccgtgggccgaggccggccacgtggtcgccgtgcagcagttcgacctcacg
cccgcaccccgtcccgccgtgctcgcccgctgggtcgacgccgacgaggacgtcatcccc
gacgcgggggccacgcgcctcaccctcggcgacggcgagttcgacctcgccaccggccgc
ctcgtgcgcctcggcgcgctcgaggtcgacgggccgcgtctggagctgtggcgcgccccg
accgacaacgaccgcagcgacagcagcgggtcctacgagctggcggatccgcgcctcaca
ttcggcaagggcgtgcccgggccgtcgagcgaggcgcgctggcgccaggcgggcctcgac
cggctcacgcacagggtccgctcggtgaaggtcggctccggttcgctgacggtcgtcgtg
cgcacgagcgcggcgcagtccttcgactcggtcgacacgacgtactgctggaccgagggc
gccgacggcgacctgggcctccgcgttgacatcgtgccgagcgccggctgggccatcagc
tggccgcgcgtcgggatcctgttcgacctgcccgcgagcgtcaccaacgcggagtggttc
ggcaccgggccgttcgagtcgtaccccgactcgcgccgggccgcgctcgtcggccggttc
tcgtcgctcgtcgacgacctgggcgccgtgtactcgataccgcaggagaccggccaccgc
agcgacctgcgcgagctcgagctcggcacgttcgacggcgagcacggcatcgtgatccag
gcccggcccgacaccgcgggtcgccgccccggcttcacggcctcccggcacacgccgcag
gagctcgaccgggccgcgcacccgcacgagctgcccgcgagcgaggcggtgcacctgtac
atcgacgccgcgcagcacgggctcggctcgcgcgcgtgcggcctcgacgtgctgcccgag
caccagctctggccgtcggcgcgcacgctggagctgacgatccgcagccgctga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (34)   

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