KEGG T00678: CMS

Clavibacter michiganensis subsp. sepedonicus: CMS_3106

Entry

CMS_3106 CDS T00678

Gene name

ddlB

Definition

D-alanine--D-alanine ligase (EC:6.3.2.4)

Orthology

K01921

D-alanine-D-alanine ligase [EC:6.3.2.4]

Organism

cms Clavibacter michiganensis subsp. sepedonicus

Pathway

cms00473	D-Alanine metabolism
cms00550	Peptidoglycan biosynthesis
cms01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Alanine metabolism [PATH:cms00473]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:cms00550]

SSDB

Motif

Pfam:

Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp_3 ATPgrasp_Ter TTL CPSase_L_D2 ATPgrasp_YheCD

Other DBs

NCBI-GI:

170783394

NCBI-GeneID:

6158580

UniProt:

B0RDP5

Position

3251638..3252603

AA seq 321 aa
MTAHEPLSVLVLAGGISHERDVSLRSGRRVVDALRGAGVVASLRDPDATLLDFLRETPPA
VVWPVLHGASGEDGALLGLLELAGVPYVGSSARAARLAWDKPTAKAIAGTVGIRTPRSVT
LPKDTFRELGAAAVLRLVTEAVPAPYAVKPARGGSAQGVTIVRDADALPRAMVDAYTYGD
VALIEQLIEGTEVAIGVIDTGAGPEALPATEIVPTSGVYGYEARYNAGLTRFYTPARISP
EEAAAASTAAVGIHRALGIGQMSRVDIIIDAAGEPWFLEVNVIPGLTETSLLPQGLAAAG
IEVGDLYRRLAEAARDASTIR

NT seq 966 nt +upstreamnt +downstreamnt
atgaccgcacacgagcccctttccgtcctcgtcctcgcgggcggcatctcccatgagcgc
gacgtgtcgctccgcagtgggcgccgcgtggtggacgccctccgaggagcgggtgtcgtg
gcgtcccttcgtgaccccgacgccaccctcctcgacttcctgcgcgagacgccccctgcc
gtcgtctggccggtcctccatggcgcgagcggagaggacggcgcgctcctcggcttgctc
gagctcgccggcgtcccgtacgtgggctcctccgcccgcgccgcccgcctcgcgtgggac
aagccgaccgccaaggcgatcgcggggaccgtcgggatccggacgccgcgatccgtgacc
ctgccgaaggacacgttccgcgagctcggagcggcagccgtcctccggctcgtgaccgag
gccgtgcccgccccgtacgccgtcaagccggcccgcggcggatccgcgcagggcgtcacg
atcgtgcgggacgcggacgcccttccccgggcgatggtggacgcctacacctacggcgac
gtcgcccttatcgagcagctcatcgagggcaccgaggtcgcgatcggcgtcatcgacacc
ggcgccggccccgaggccctgcctgcgacggagatcgtccccacctccggcgtgtacggc
tacgaggcgcgctacaacgcgggtctcacgcgcttctacacgccggcacgcatctccccc
gaggaggccgccgcggcctccaccgcggccgtcgggatccaccgcgcgctcggcatcggc
cagatgtcgcgagtcgacatcatcatcgacgccgcgggcgagccgtggttcctcgaggtc
aacgtcatccccggcctcacggagacgtcattgctcccccagggcctcgctgccgcgggc
atcgaggtgggcgatctgtaccgtcggctcgccgaagccgcgcgggacgcctcgaccatc
cgctga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

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