KEGG   Cordyceps militaris: CCM_07657
Entry
CCM_07657         CDS       T03108                                 
Name
(RefSeq) transcription initiation factor
  KO
K03128  transcription initiation factor TFIID subunit 2
Organism
cmt  Cordyceps militaris
Pathway
cmt03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cmt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CCM_07657
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cmt01002]
    CCM_07657
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmt03021]
    CCM_07657
   03036 Chromosome and associated proteins [BR:cmt03036]
    CCM_07657
Peptidases and inhibitors [BR:cmt01002]
 Metallo peptidases
  Family M1
   CCM_07657
Transcription machinery [BR:cmt03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     CCM_07657
   Coactivators
    SAGA/TFTC/STAGA complex
     CCM_07657
Chromosome and associated proteins [BR:cmt03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     CCM_07657
SSDB
Motif
Pfam: Peptidase_M1
Other DBs
NCBI-GeneID: 18169667
NCBI-ProteinID: XP_006672860
UniProt: G3JQW1
Position
Unknown
AA seq 1463 aa
MESERPFTQNGYGDLPPVDDLPVKEYFVLKQEVSLEVDFRDKCIHGTTDVFVVTFTDKVE
EVFLDAAQCEIDTNRITIAEMREVNGEAIEGHKRRAAAEYNDPYKKLSHPQGWNWRAEHY
DLRRIRARGVFHTRKSDVPAENREFEGCTPAYGSLKVKLRGRDERDRPRLIVRKSTMNLE
PLERAHKQYKITVPFVNRNPRDGLHFVGVDSLDSRFTHMYTRHSIQPGTASCIFPCIDDH
GSRCDWRVSIKHPRTLGDALQQALATKQDSGFLDRSFKLAEEDKLREMSVVCSGFLVEET
TDADDESKKIMTFEPEKKVSVQKLGFAVGPFEHIDLSSEFRTEEDELKLGMSALKIHTYC
LPGRGDWVRHTSAALTMAADFLTYTFARYPFSNFKLCFVDDLVDDTVSLHSLGFASNRLL
YPEDVIDTEIEVTRQLVLTLTSQWIGINMIPNTRNDMWLVVGMAHYMTDLFMKRICGNNE
YRFRMKTMSDKLAELDVGRPAIFDLGANLHLDDAEMKLMTLKAPLVFFILDKRMNKASGG
HGLTRVLQKLLTRAQIEGSDKSMILDTEKFKTICEKGSRYRLETFWNQWVYGSGCPKFDV
KARFNKKRLCVELTLNQVQFQKAKKPQLEKDDFLREIRERRAEVPLGETQPLFTGPMTVR
IHEADGTPYEHILEIREDATRATKFEIPYNTKYKRLKRTRRMKEKHTGQNIEITDNNDDA
LLYCLGDVLQSPEDQREWELIDWDPETERKMDQESYEWIRLDADFEWASDMSRTLEPYMY
VSQLQQDRDVVAQQDAMLYLAQGPLHPIASGFLVRTLIDRRYFHGIRTMAAAALTRQSNI
KDIPLLGMRQLMRAFREMYCYEQTNQPRPNDFTDKKQYNVRCAIIKAIAEVRDHTNKCPM
EARRFILDQLRLNNNEGNPYSDHFYIAFLVKSLSISLIPSKQDDWLTRQNRIPNEEETAF
LEDALEQIERVLRRDEWTNSYQNTWTLAGLDAKQRLMKADVIPKNFTDFGQYLLDGTRDL
IRIKCFEALIDLGAMMDPTFFSFMMYSFMTDRSPYVRSKLIAAVARGLAAIAFGEHTKVA
KIEPSADDGDGLLLVQDSAQEIEARKEMFARKENLGSALKALKKEMEETYMADERHYSTA
MRRALDHPDLGRTEVESLLDLASMMFEEAQSWLLTLNLPKRWKAARPPAPERPSNRMLVT
FKSYYKIKPKVPLPAMVAAAPAAPVSISSGSDIKKLPTIGRTPSIKISTKPTFSSIPRQS
PKPPILLDSIVAHSQAQANGSPASATIQVAKRPRPEKEEHASPAPKRPKTDTPSEAKTQW
KKRRMVTLKTANPKRLAVILGKSLSSSPAPLRTALPGSSAPGSSRRESSTENTPLKIRKP
LPSGDVVRRPLPTGDAVSSSHHTPASKPKISLSMSSTPAAMRAASTPSAILGGGRSPAPE
TPSSTTSRPKIKIIRKPQPPPPS
NT seq 4392 nt   +upstreamnt  +downstreamnt
atggaatccgagcgcccgttcacgcagaacggctacggcgacctgccgcccgtcgacgac
ctccccgtgaaagagtatttcgtcctcaagcaggaagtcagcctcgaggttgactttcgc
gacaaatgcatccatggaactaccgacgtgtttgtcgtcacctttacggacaaggtggaa
gaagtgttcctcgacgcagcgcaatgcgaaatcgacacgaaccgaatcaccattgccgag
atgcgtgaagttaacggcgaagcaatcgagggtcacaagcgcagagccgctgcggaatac
aacgacccgtacaagaagctctcacatccccaggggtggaactggagagccgagcactac
gatttgcgccgcattcgcgctcgaggagtttttcacactcgaaagtccgacgttcccgcc
gaaaatagagaatttgaggggtgtacgccggcatacgggtcattgaaagtaaagctgcgt
ggcagagacgaacgagatcgcccgaggttgatcgtcaggaagtctaccatgaatctcgag
cccctcgaaagggcgcacaagcaatacaaaattactgtcccgtttgtcaatcggaatcct
cgggatgggttgcattttgtgggcgtggactctctggacagccgctttacgcacatgtat
acccgtcactcgattcagccgggcaccgcgagctgcatctttccgtgcatcgatgaccac
ggctcacgttgtgattggcgtgtctcgattaagcaccctcggactctcggagacgcctta
caacaagctttggcgactaagcaggactctggctttcttgatcgctcgttcaagcttgca
gaagaggacaaacttcgagagatgtctgttgtatgctcaggctttctcgttgaagaaacc
acggacgcagacgatgagtccaagaagatcatgacgtttgagcccgagaagaaagtctcg
gttcagaaactaggatttgcagtcggcccattcgaacatattgacttgtcttcggaattt
cgaaccgaggaagatgaactcaagcttggtatgagtgcactgaaaatccacacatattgc
ttgcctggaagaggggactgggtgagacatacctcggccgcactcaccatggccgcggat
tttctcacatataccttcgcccgctacccgttttccaacttcaaactttgctttgttgac
gacttggtcgacgatacggtatcattacactcactaggatttgcaagcaaccgcttgctg
tacccagaagacgtcatcgacactgaaatcgaggtgacgcggcagcttgttctcacgttg
acatcacaatggattggcatcaatatgatacccaatacacgcaacgatatgtggcttgta
gtgggcatggctcactacatgaccgatttgttcatgaagcgcatctgtggaaacaacgaa
taccggtttcgcatgaagaccatgtccgacaaactggctgagcttgatgttggtcgccct
gctatctttgacctcggcgccaatttgcatcttgacgacgcagaaatgaagctcatgaca
ctcaaggcaccccttgtatttttcatcctggacaagcgcatgaacaaggcatcgggcggt
catgggttgaccagagtactgcagaagcttttgacacgcgcgcagattgaaggaagcgac
aagtctatgattctggataccgaaaagttcaaaactatatgcgaaaaggggtcccgatac
cgcctagagaccttttggaatcaatgggtctacggctccggttgtccaaagtttgatgtc
aaagcccgatttaacaaaaaaaggctatgcgtcgaattgacattgaatcaagtacaattt
caaaaggcaaagaagcctcaactcgaaaaagacgactttctgcgcgagatcagggagcga
cgagctgaagtgcctcttggggaaactcaaccattatttacggggccaatgactgtacga
attcacgaggctgacggaacgccatacgagcatattcttgagatccgcgaagatgccaca
agagccaccaagtttgagattccctataacacgaaatataagcgactcaagcgaacacgg
cgaatgaaggagaaacacacaggtcaaaacatagaaatcacagacaacaatgacgatgct
ttgctctattgtctcggagatgtcttgcaaagcccagaggatcagcgcgagtgggagttg
atcgactgggaccccgagacggagcgaaaaatggaccaagaatcatacgaatggatccgt
cttgacgctgattttgaatgggcatccgacatgtcgcggaccttggagccatatatgtac
gtgtcgcagctacaacaagacagagatgttgttgcacagcaagacgccatgctttacctt
gcgcagggcccgttacatccaatcgcctccggcttcctggtgcgaaccctcattgaccga
cgatatttccatggaattcgcacaatggcggcagctgctctgactcggcagtctaatatc
aaagatattccattactaggaatgcgccagctcatgcgggccttccgagagatgtattgc
tacgaacaaaccaaccagcctcgcccaaatgactttaccgacaagaagcaatacaatgtt
cgttgcgcgatcatcaaagccatcgctgaagttcgtgatcacaccaacaagtgcccgatg
gaagcacgtcgcttcatcctcgaccagcttcgcttgaataacaacgagggcaatccgtac
tcggaccatttctacattgctttcctcgtcaagtcgctttccatttcgctcatcccgtcc
aaacaggacgactggctcacgcgccaaaacaggattccaaacgaagaggagactgccttc
ttagaagacgctctcgaacaaattgagcgagtcctgcgccgtgatgaatggactaattcg
taccaaaatacatggacgctggccggattagacgcgaaacagcgcttgatgaaggcagac
gtgattcccaaaaacttcacggactttggacagtacctattagacggaacccgagatttg
attcgcatcaaatgctttgaggccttgattgacctgggcgctatgatggatccgacattc
ttcagctttatgatgtattcgttcatgacggatcggtctccgtacgtgcgctcaaagctg
attgccgctgttgctcgaggacttgctgccattgcattcggagagcacacgaaggttgct
aagattgaaccttctgctgacgacggcgacggcctgctgcttgtccaggatagcgcccaa
gaaattgaagcaagaaaagaaatgtttgctcgcaaggagaatttgggttctgctctgaag
gcgttgaagaaagaaatggaagagacatatatggctgatgagcggcattacagcacggcc
atgcgcagagcgctggatcacccggacctcggccgcacggaagtagaaagtctcctggat
cttgcttccatgatgttcgaggaggcgcagagctggctcttgaccctcaatctgcctaag
cgatggaaggcagcgcggcctccagctccagagaggccctctaaccgcatgctggtcacc
ttcaagtcttactacaagatcaagccaaaggtcccactcccagccatggtggcagcagca
cccgctgctccagtatcaatatcgagcgggagcgacatcaagaagctacccaccattggg
agaacaccgtctatcaagatcagcaccaagccgactttctctagtatcccgcgacaatca
cccaagccgccaattttgctagattctattgttgcccacagccaagctcaagccaatggg
tccccagcatctgccaccatccaggtagcgaagcggccgcggccggagaaggaagagcat
gcgtcgcccgcaccgaagcgtcccaagacggacactccctcggaggccaagacccaatgg
aagaagcggcgtatggttaccctcaagacggcaaaccccaaacgactggctgttatcctg
ggcaagtctctgtcctcgagcccggcaccgctcagaacagccttgccggggagctccgca
ccaggaagttcgcggcgcgaatcgtccactgagaatactcctttgaaaattcgcaagccg
ttgccttctggcgatgttgttcgacgaccactgccaacgggcgatgctgtgtcctcgtcg
catcacacgcctgcgtcaaagcccaaaattagcctcagcatgtcgtccacgccggcggct
atgagggcggcttctacgccgtccgccatcctgggtggtggcagaagccctgcgccggag
acaccatcgagcacaacatcgcgacccaagatcaagatcattcgaaagccgcagcccccg
ccgccgtcatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (46)   

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