KEGG   Chlamydia muridarum Nigg: TC_0794
Entry
TC_0794           CDS       T00028                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
cmu  Chlamydia muridarum Nigg
Pathway
cmu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TC_0794 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmu03021]
    TC_0794 (rpoA)
   03400 DNA repair and recombination proteins [BR:cmu03400]
    TC_0794 (rpoA)
Enzymes [BR:cmu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     TC_0794 (rpoA)
Transcription machinery [BR:cmu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     TC_0794 (rpoA)
DNA repair and recombination proteins [BR:cmu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      TC_0794 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_CTD RNA_pol_A_bac RNA_pol_L TerD
Other DBs
NCBI-ProteinID: AAF39597
UniProt: Q9PJN4
Position
complement(936869..938053)
AA seq 394 aa
MSTKKTTKSVVIAKEFGMSDNSHNLLYNKFELPESVKMSPVEGAAGGIDKVARFVADPLE
KGMGHTLGSALRRALLIGLEAPAIVSFSMTGVLHEYMAVEGIIEDVTNIVLNLKGSLLKK
YPLQDCEGGRASQKLRATISIDASDLAAAGGQKAITLGDLLQEGTFEAVNPEHVIFTVTR
PMQLDVMLRVAFGRGYTPSERIVLEEREMNEIVLDAAFSPVVLVNYFVEDTRVGQDTDFD
RLILQVETDGRVAPKEAVAFATQILSKHFSVFEKMDEKRIVFEEAISVEKENKDDILHKL
VLGINEIELSVRSTNCLSNANIETIGELVIMPEPRLLQFRNFGKKSLCEIKNKLKEMKLE
LGMDLSQFGVGLDNVKEKMKWYAEKIRSSKNTKG
NT seq 1185 nt   +upstreamnt  +downstreamnt
gtgtcgaccaagaaaacgacgaagagtgtagttatagctaaggagtttgggatgtcggat
aattcacataatttactttataacaaatttgagttgcctgaatcggtgaaaatgtctccc
gttgaaggtgcagctggtggcattgataaagtagctcggtttgttgctgatcccttagag
aagggaatggggcacacattgggaagcgccttgagacgtgctttattaatcggcctggaa
gctcctgctattgtctctttttctatgacaggagttttgcatgaatacatggcggtagag
gggatcatcgaggatgttaccaatatcgttttgaatttgaaaggctctttgctcaaaaag
tatcctttacaagattgtgaaggaggaagagcttcccaaaaattgcgagctacaatttct
atcgatgcatccgatttagctgctgctggtgggcaaaaagcaattactttaggggatttg
ctgcaagaaggcacctttgaagctgtaaatcctgagcatgtaatttttacagttactcgt
cctatgcaactagatgttatgttgcgggttgctttcggtagaggatatactccttccgag
agaattgttctcgaagaaagagagatgaatgagatcgttttagatgccgccttctctcct
gttgttttggtcaattatttcgttgaagatactcgtgttggccaggatacggatttcgat
cgtttaatattgcaagtggaaacggatggtcgtgtagctcctaaagaggctgtagctttt
gctacgcaaattttgagcaaacatttttctgttttcgaaaaaatggacgagaaacggatc
gtttttgaagaagccatttctgtagaaaaagaaaataaagacgatattcttcacaagtta
gttttgggcattaatgagatagaactctctgtacgatccacaaactgtttgtctaatgcc
aatatcgaaacgataggagagctggtaattatgccagagcctcgcctgttacaatttaga
aacttcggtaagaaatctctttgtgagattaagaataaactgaaagaaatgaaattagaa
ttgggcatggatcttagccaatttggcgttgggctggataatgtcaaagaaaaaatgaag
tggtatgccgagaaaattcggtcgagtaagaataccaagggataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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