KEGG   Chelonia mydas (green sea turtle): 102935688
Entry
102935688         CDS       T02989                                 
Symbol
SCN8A
Name
(RefSeq) sodium channel protein type 8 subunit alpha isoform X4
  KO
K04840  voltage-gated sodium channel type VIII alpha
Organism
cmy  Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:cmy04040]
    102935688 (SCN8A)
Ion channels [BR:cmy04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   102935688 (SCN8A)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc Na_trans_cytopl PKD_channel ATP-synt_B GPHH Lustrin_cystein FUT8_N_cat
Other DBs
NCBI-GeneID: 102935688
NCBI-ProteinID: XP_037739931
Position
20:719691..834646
AA seq 1843 aa
MIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWN
WLDFSVIMMAYITEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM
ILTVFCLSVFALIGLQLFMGNLRNKCVIWPINFNKSLLENGTRGFDWQEYTNNVSNFYVI
PGALDPLLCGNSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWAFLALFRLMTQDFWENL
YQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAEQKEAEFKAM
LEQLKRQQEDAQAAAMVTSAGTVSEDAVEDDGRGRVSQSSSEISKLSSKSDKERRNRRKK
RKQKELLEGEEKGDNEKVFKSESEDGMRRKAFRLPDNRLGRKFSIMNQSLLSIPGSPFLS
RHDSKSSIFSFRGRFRDPGSENEFADDEHSTVEESEGRRDSLFVPFRGRERRSSYSGYSG
YSQGSRSSRIFPSIRRNVKRNSTVDCNGVVSLIGGPASNRPVGRLLPEGTTEVEIKKKPT
GSLLVSMDQLNASYGRKDRTNSIMTVLTNTLVEELEESQRKCPPCWYKFANTFLIWECHP
HWIKLKEIVNMIVMDPFVDLAITICIVLNTVFMAMEHHPMTPEFQDVLTVGNLVFTGIFT
AEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKS
WPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINVECVLPRW
HMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLL
SSFSADNLAATDDDGEMNNLQIAVIRIKQGIAWIKVKAHEFMQAHFKQREADEVKPLDEL
YEKKVNCIANHTGADINRDIDYQKNGNGTTSGIGSSVEKYIIDEDHMSFINNPNLTVRVP
IAVGESDFENLNTEDFSSDTDPNGSKEKLDDTSSSEGSTIDIKPEVEEVPVEAPEEYLDP
DACFTEGCVQRFKCCQVSIEDGLGKSWWILRKTCFLIVEHNWFETFIIFMILLSSGALAF
EDIYIEQRKTIRTMLEYADKVFTYIFILEMLLKWCAYGFVKFFTNAWCWLDFLIVAVSLV
SLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIF
WLIFSIMGVNLFAGKYHYCFNETSEERFEIEIVNNRTDCEALMPPNSTEIRWKNVKINFD
NVGAGYLALLQVATFKGWMDIMYAAVDSRKQEEQPKYEDNIYMYIYFVIFIIFGSFFTLN
LFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNSIQGAVFD
LVTQQAFDIIIMMLICFNMVTMMVETDTQSSQMSDILWWINLVFVILFTCECVLKMFALR
HYYFTIGWNIFDFVVVILSVVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGAKGI
RTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMFNFETFGNSMIC
LFQITTSAGWDGLLLPILNRPPDCDLDKEHPGSSFKGDCGNPSVGIFFFVSYIIISFLIV
VNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQFIEYCKLADFADALEH
PLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGELDILRQQMEERFVASN
PSKVSYEPITTTLRRKQEDVSAVVIQRAYRVRLAKRGFICRKSASTKLENGGTNREKKEG
TPSTASLPSYDSVTKPEKEKQLRVEEGRRERAKRQKDFKESKC
NT seq 5532 nt   +upstreamnt  +downstreamnt
atgatcattatgtgcactattttgaccaactgtgtattcatgacttttagtaacccacct
gaatggtcgaagaatgtggagtacacattcactggtatttatacatttgaatcacttgtg
aaaattattgcaagaggtttctgcatagatggttttactttccttcgtgatccatggaac
tggctagatttcagtgtcatcatgatggcgtatataacagagtttgtaaacctaggcaat
gtttcagctctgcgcactttcagggttctgagagctttgaaaactatttctgtaattcca
ggcttgaagaccattgtgggcgccctaattcagtctgtgaagaaactgtcagatgtaatg
attttgacagtgttttgcctcagtgtctttgctttaatcggcctgcagctgtttatgggc
aatttgaggaacaagtgtgtaatatggccaattaacttcaataagagcttactagagaat
ggcaccagggggtttgactggcaagaatacaccaacaatgtctcaaacttttacgtaatc
cctggggcccttgatcctttgctctgtggtaacagctcagatgcaggccaatgtccagag
ggttacacatgcatgaaagcaggaaggaatccaaactatggctacacaagctttgacact
ttcagctgggctttcctagccttatttcgccttatgactcaggatttttgggaaaacttg
tatcagttaaccttgcgagcagcaggaaaaacgtacatgatattctttgtcctggttatc
tttgtgggttcattctatctggtcaatctgatcttggctgtggtagccatggcttatgag
gagcagaaccaggccacgctggaggaagcggagcaaaaggaagcagaattcaaggccatg
ttggaacagctgaaaaggcagcaggaagatgcgcaggctgctgccatggtcacttcggca
gggacggtctcagaagatgctgtggaggatgatggcagggggagggtgtctcagagctct
tctgagatttccaaactcagctctaagagtgacaaggagcggcggaacaggaggaagaaa
cggaagcagaaggagctcttggaaggagaggagaagggtgacaacgagaaggtgttcaag
tctgaatcggaggatggaatgaggagaaaagcttttaggctgccagacaacaggctggga
aggaaattttccatcatgaatcagtcccttctcagcatcccaggctcccctttcctctcc
cggcacgacagcaagagcagcatcttcagcttccgagggcgcttccgcgatcccggctcc
gagaacgagtttgctgatgatgagcacagcacggtggaggagagtgaaggcaggagagac
tcccttttcgtccccttccgtggccgggaacggagaagcagctacagtggctacagtggc
tacagccagggcagccggtcctcacggatcttccccagcatccgccggaacgtgaaaagg
aacagcacagtggattgtaatggcgtggtgtcccttattggcggcccggcatctaatagg
cccgtgggacgccttctgcctgagggtactaccgaggtggaaattaaaaagaaacctacc
gggtctctcttggtctcaatggatcaactgaatgcatcctatggaagaaaggatcgaacc
aacagtataatgactgttttaactaatacccttgtagaagagttggaagaatcccagagg
aagtgccccccctgttggtacaaatttgccaacaccttcctgatctgggagtgccaccca
cactggatcaagctgaaggagatagtgaacatgattgtcatggatccctttgttgacctg
gccattaccatctgtattgtgctgaacactgtcttcatggcgatggaacaccatcccatg
acccctgagtttcaagatgttctgactgtaggaaatctggttttcactggaattttcaca
gcagaaatgttcctgaagctcatagccatggacccctactattatttccaagaaggttgg
aacatttttgacggatttattgtctccctcagtttaatggaactgggtctagcagacgtg
gaagggctttcagtgctgcgatctttccgattgctgagagtcttcaagctggcgaagtcc
tggcccactctgaacatgctgataaaaatcattggtaactcagtgggtgccttgggaaac
ctgaccttggtgctggccatcatcgtgttcatctttgctgtggtgggcatgcagctcttt
ggcaagagctacaaggagtgtgtctgcaagatcaacgtggagtgtgtgctaccccgctgg
cacatgcacgatttcttccactccttccttattgtcttccgcgtgctgtgtggggagtgg
attgagactatgtgggattgcatggaagtggcaggacaggccatgtgcttgattgtcttc
atgatggtcatggtcatcgggaatttagtggtgctgaacttgttcttggctttgctgctg
agctctttcagtgcagataacttagcagcaacagatgatgatggggagatgaacaacctg
caaatagcagtcattcgcatcaagcagggaatcgcctggatcaaggtgaaagcacatgag
ttcatgcaggcgcatttcaagcagagagaggcggatgaggtcaaacccttggacgagttg
tatgaaaagaaggtgaactgcatcgctaaccacacaggggctgatatcaacagggacatt
gattatcaaaagaatggcaatggcaccaccagcgggattgggagcagtgtggagaaatac
atcatagatgaagaccacatgtccttcatcaataaccccaatctgaccgttcgggtaccc
attgctgtgggtgagtcagattttgaaaacctcaatacagaagacttcagcagcgataca
gatcccaatggcagcaaggagaaactggatgatactagctcttctgagggcagcaccatt
gatataaagccagaggtagaggaagttcctgtggaagcaccagaagaatatctggaccca
gatgcatgcttcacagaaggttgtgtgcagcgctttaagtgctgtcaggtcagtattgaa
gatgggctgggcaaatcctggtggatcttgaggaagacctgttttctgattgtggagcac
aactggttcgagactttcatcatcttcatgatcctactgagcagtggagccctggccttt
gaggatatttacatagaacagagaaagaccatccggaccatgctggagtatgcagacaag
gtcttcacctacattttcattctggagatgttgctgaagtggtgtgcttacggattcgtc
aagttcttcaccaacgcctggtgctggctggatttcctcattgtggctgtctctttagtc
agccttgtagctaatgccctgggctactcggaactaggtgccataaagtcccttaggaca
ctaagagctttgaggcctttaagagcgttgtcccgatttgaggggatgagggtggttgtc
aacgccctggttggcgctatcccttccattatgaatgtgttgttggtctgccttatcttc
tggctgattttcagcattatgggggttaacctgtttgctgggaaataccattactgcttt
aacgagacatctgaggagcgcttcgaaatagagatagttaacaacaggaccgattgtgaa
gcactgatgccgcccaactccactgagatccgatggaagaacgtgaaaattaactttgac
aatgttggggcaggatacctggctcttctccaagttgctactttcaagggctggatggat
atcatgtatgcagcggtagattccagaaagcaagaagagcaacccaagtatgaggacaac
atctacatgtacatctattttgtaatcttcatcatctttggctcctttttcaccctgaac
ttgtttattggtgtcatcattgataacttcaatcaacaaaagaaaaagtttggaggtcag
gatatcttcatgacagaagaacaaaagaaatactacaatgccatgaaaaaacttggctca
aagaaacctcagaaacctattccccggcctctgaacagcatccaaggagctgtctttgac
cttgtcactcagcaagcattcgatatcatcatcatgatgctcatctgcttcaacatggtg
accatgatggtggaaacagacacacagagtagccagatgtccgacatcctctggtggatc
aacctggtgttcgtcatcctcttcacctgtgagtgcgtgctgaagatgtttgccttgcgg
cactattatttcaccattggatggaacatttttgacttcgtggtcgtgattctgtccgtc
gtgggaatgttcctggctgatctcattgagaagtattttgtgtcacccactctcttccga
gtcatccgactggcccgtattggccgcatcctgcgtctgatcaaaggggccaaggggatc
cgcaccctgctttttgccttaatgatgtccttgcctgccttgttcaacatcggcctcttg
ctgttcctggtcatgtttatcttctccatctttggcatgtcgaacttcgcctacgtaaag
cacgaggccggcatagacgacatgttcaactttgagaccttcggcaacagcatgatctgt
ttgttccagatcaccacctcggctggctgggatggcttgctgttgcctatcctgaaccgg
ccgccggactgcgacctagataaggagcaccccgggagcagcttcaagggagattgtggt
aacccctctgtggggatctttttcttcgtcagctacatcatcatctcctttctgatcgta
gtgaacatgtatatcgccatcattctggagaacttcagtgtagccacagaggagagtgct
gacccgctgagcgaggacgactttgaaaccttctatgagatctgggagaagtttgaccct
gatgccacacagttcattgaatactgcaagctggcagactttgccgatgctttggagcac
ccactccgtgtccctaagcctaacactatcgaactcatcgccatggacttgcctatggta
agcggggacaggatccactgcctggacatcctgtttgccttcaccaagcgtgtgctgggg
gacagtggggagctggacatcctgaggcagcagatggaggaaaggtttgtggcgtctaac
ccttccaaagtgtcttatgagcccatcacgaccacgctccggcgcaagcaggaagatgtc
tcggcagtggttatccaacgggcttacagggttcgcttagcaaaacggggctttatttgc
cggaagtctgcctctactaagctggaaaatggaggaacaaatcgggagaaaaaagaaggc
accccatccactgcatccctcccatcctatgacagtgtaactaaacctgaaaaggagaaa
cagctgcgggtggaggaaggaagacgagaacgagcaaaaagacaaaaagatttcaaggag
tccaagtgttga

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