KEGG   Chelonia mydas (green sea turtle): 102939938
Entry
102939938         CDS       T02989                                 
Symbol
PARP4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X1
  KO
K10798  poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
Organism
cmy  Chelonia mydas (green sea turtle)
Pathway
cmy03410  Base excision repair
cmy04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    102939938 (PARP4)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    102939938 (PARP4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cmy03032]
    102939938 (PARP4)
   03036 Chromosome and associated proteins [BR:cmy03036]
    102939938 (PARP4)
   03400 DNA repair and recombination proteins [BR:cmy03400]
    102939938 (PARP4)
Enzymes [BR:cmy01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.2  Pentosyltransferases
    2.4.2.30  NAD+ ADP-ribosyltransferase
     102939938 (PARP4)
DNA replication proteins [BR:cmy03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    102939938 (PARP4)
Chromosome and associated proteins [BR:cmy03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    102939938 (PARP4)
DNA repair and recombination proteins [BR:cmy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     102939938 (PARP4)
SSDB
Motif
Pfam: VIT PARP VWA_3 VIT_2 VWA VWA_2 BRCT BRCT_2 VWA_CoxE PARP_reg PTCB-BRCT
Other DBs
NCBI-GeneID: 102939938
NCBI-ProteinID: XP_027677380
Position
1:39341381..39455716
AA seq 1854 aa
MTVGIFANCVFFLKMKHLPIQEKNRLRTCIKENGGIIYFVLNHECTHVIVDNVAVLSSYH
LKTIEKYRLPIVSADFVWKSAEERKLLQIDDYESSKSLEGTSDQKPSCYGEKKPSSSEHD
IKEKEDTTEKNENCGPDPTPLEVSDCSGGPSMESIRFYSENDQDIPYFPQDFEVAKYDAL
EKISTEKGKQVVVIELQCSQESCEFPFRIAAHFSMSEGFKSKKQFIATKTSEEVRKNYEI
YVEDLKNQDFILRETFPPGADNLASMKLQELLLEEAINSSTLSQEISAFVELIWAEALGH
LDHLLLEPVNNISLNDVSKGEGILLQIKNAMNEGTAAKALKAMMMEFYRIIRHKSGIDYN
ITKKLLSSKQDLCQLIRDMLNVCETSMSSPNPPSRAKYRALRCKIQAINPKSKEFLNVKQ
QVLKNNHSDCPVKVLQIFRVGRISETAEFLSSLGNVQSLFHASSVRNFVGILSRGLLLPK
IVVEDHGVERTDIGNLGSGIYFSDSISTSIKYSLPSEMDGTRLLAVCNVALGTCLDLYKK
DLSLTNAPSGYNSVHGVRKTANIYSDFEDDEFVVYKTCQVKMRYIVKFCLPGDQIKQFQP
GIVTELAQDLPATSHCHLQPEDYALPTVNLLNHVKTGLQDTSGNPVPLEDIHIKGRIIDF
IAQIVVFQTYTNQNDNYIEAKYVFPLDGTAAVCGFEAFINGKHIVGKVKEKEQAHKEYRD
AISRGDGAYLMDQDAPDVFTVSVGNLPPKTTVLIKVTYITELSFQDGCITFQMPAAVAPW
QQDKALNENTQDTVKKVCVKQIGTKKGGFCVAMSIEMPHSIERIHSWTHTLKIKKTDCKA
VIRTVENSSLDTSGFALEIWISQVYLPRMWVEKHPNKESEACMLVFQPKFETKFKGIQLS
GEIIICLDCSNSMEGSTLQQAKKIALHVLQMSCFRQRVNVIRFGTNFTEFSSYSKDIKSD
LAAVKEFIISATPTMGNTDLWKTLRYLSLLYPSQRGRNILLLSDGHIQNESMTIQIVKEN
VRHTRLFTCGFGSTANHHMLRSLSQYGAGAYEYFDPKSKYNWLKKIESQRSRIFSPGCSS
VSIKWQQFDANAPEPLQAPAQIQSLFNNERLLVYGFIPHCTQATLNALINDQELQAMVST
TELQKTTGTLLHKLTARAIIRDYEDGILHENETEHEMKKHTLKVLIINLSMENSIITQFT
SFVAVEKRDVNEVKHAGLPNILELIAEEDIDFLPYMDWEHETSGHGYLSSNRGVGFGRCE
SIMSTVWPPSDPQGEEPLYVPGWVESGRVHPSHWKLRERTGSTKRGTFSSVGAEAGQETG
EYCSLVASYSAAEPSGALTPEETKSKEELLMAVYPREMDDTYRAQVVFPQATTAAFLSGQ
LVGTGGIPDNAQRSEGMALPTAAFGRPKRDTAVLALSDWQGAETRIRCLENEQDVNEVQH
AGLPNIPMAPEHLDVLPYKNWEHDTSGYLSSNRGVGFGRSESVPFHAVTSGFSDHFLTGG
DKQLKSLQFRSDEEVPLVEECILPDSTELSFIKAAKVKYDPGAARVGLFGSISVPQPKFS
LHDQSLLNIRLPKPPASKPFSFQVSIPPPCPLPYAASCPPRPPPCAPPCPPPFPHEFTRG
LWSDLKSSFTPVGRTLKKANFETQVTPEVLASSARFRLGSPMLQTAPKCGEKLHRELSKD
LFLTAMRKKQLGKTSPQMRIQQSPPSAVSWTQIFELQNQDGFWNLSPELGVILDLDVDYL
TNIFLAKKGIWSLGPKGREVLQLIATLLVLQFIRYKQQLEGITFKSLMKLDDSPTSSAIH
WAFASVKKAVEWVRRVDRQFPAICHRLELGKDWDSATKKLLGIELISTNFPPSI
NT seq 5565 nt   +upstreamnt  +downstreamnt
atgactgtgggaatctttgcaaactgtgtgttctttcttaaaatgaaacatttacccatt
caggagaagaacagactgagaacatgcattaaagaaaatggtggaataatttattttgtg
ctaaatcatgagtgtacacatgtcattgtggataatgttgctgtactcagctcttatcat
ctgaaaactattgagaagtatcgactccccattgtaagtgctgattttgtatggaaatca
gcagaagaaagaaaacttttacagattgatgactatgaatctagtaaatcattggaaggt
acttctgatcaaaagccaagctgttacggtgaaaaaaaaccctcatcttctgagcatgat
attaaggaaaaagaggataccactgagaagaatgaaaactgtggccctgatcccactccc
ttggaagtcagtgattgctctggtgggccaagtatggagagcatcagattttattcagaa
aatgatcaagatattccttattttccacaagattttgaagttgcaaaatatgatgccctt
gaaaaaattagtactgagaaaggcaaacaggttgtagttattgaattgcagtgttcccag
gaatcatgtgagtttccctttcgaatagctgcacacttcagcatgtcagaaggatttaag
agtaaaaaacagttcatagcaactaagacttctgaagaagtaagaaaaaattatgagatt
tatgttgaagatttgaagaaccaggattttatattaagagaaacctttccaccaggtgca
gacaatttagcctctatgaaattacaagagctacttctagaggaagccataaattcaagc
actttatcccaagaaattagtgcttttgtggaattgatctgggcagaagcacttggtcat
ttggaccatttactacttgaaccagtaaacaacatcagcctaaatgatgtgagcaaaggg
gaaggtattctacttcaaataaagaatgcaatgaatgagggaacagcagcaaaggcactg
aaagcgatgatgatggagttctatcgaattatacgtcacaaaagtggaatagactataat
attaccaaaaaactgttatctagcaaacaggacctctgtcagctaatcagagacatgctt
aatgtttgtgaaacaagtatgtcaagccctaacccaccatctcgtgctaaataccgggct
ttaaggtgcaagatacaagctatcaatccaaagagtaaagaatttctcaatgttaaacag
caggtgttgaaaaacaatcacagtgactgtccagtgaaagttctacaaatattcagagtt
ggcagaataagtgaaacagcagagtttctgagcagtcttgggaatgttcaatccttattc
catgcatcatctgtgcgcaactttgttggaattctctcccggggactccttttaccaaag
atagtggttgaagaccatggcgtggaaagaactgatattgggaacctggggagtggcatt
tatttcagtgattccatcagtacaagcattaagtattctctaccaagtgaaatggacgga
actcgattgttggctgtttgtaatgtggcactaggaacctgcctggacttgtataaaaaa
gatttgtcattaactaatgcaccatcaggatataacagcgtgcatggagtccgtaaaaca
gcaaacatctattcagattttgaggatgatgaatttgttgtatacaaaacctgtcaggtt
aaaatgagatacattgttaagttttgtcttcctggagaccaaataaagcagtttcagcct
ggaattgtgacagaattagcgcaagatctgccagcgacctcacattgtcatttacaaccc
gaagactatgcattaccaactgtaaatcttttaaaccatgtgaaaactggtcttcaggac
acatctggaaacccagtccctcttgaagatattcatatcaaggggaggataatagacttc
atagcacagatagtagtgtttcagacatacaccaatcaaaatgataattacattgaggca
aaatatgtctttcctttggatggcacagcagctgtatgtggatttgaggctttcatcaat
gggaaacatattgttggaaaggttaaagaaaaggaacaagcacataaggaatatagagac
gcaatcagtcgaggtgatggagcttacttgatggaccaggatgctcctgatgtttttact
gtaagtgttggaaacttaccacctaaaactacagttcttatcaaagtcacctacatcact
gagcttagttttcaggatggctgtattacttttcaaatgcctgctgctgtggctccttgg
caacaagacaaagccttaaatgaaaacacacaggatacagtaaagaaggtttgtgttaag
caaataggaacaaaaaagggtggattctgtgtggccatgtctattgaaatgccacacagt
attgaacgcattcacagttggacgcatacacttaaaataaagaaaacagactgcaaagcc
gtaatcaggactgtggagaacagttccttggacaccagtggctttgctctagaaatctgg
atttctcaagtatatctacccagaatgtgggtagagaagcatccaaacaaagagagtgag
gcatgcatgcttgtatttcaaccaaagtttgaaacaaagtttaaaggaatccagctgtct
ggagaaattattatttgtctagattgctccaattccatggagggttcaacactgcaacaa
gcaaagaagattgctctccatgttctacaaatgtcttgttttagacagagagtgaatgtt
atcagatttggcacaaatttcacagaattttcttcatattcaaaggatatcaaaagtgat
cttgcagcagtgaaggagtttattatctctgctacacctacaatgggaaatactgactta
tggaaaaccttacgttatttaagtttgttgtatccttctcaaagagggcgtaacattctt
cttctatccgatgggcacattcagaatgagagcatgaccatccaaattgtgaaagagaat
gtcagacacaccaggttatttacatgtggttttggttccacagcaaatcatcacatgctg
agatctttgtctcaatatggcgctggagcatatgaatattttgacccaaaatcgaagtat
aactggctaaaaaagatagaaagccagagatccagaatattttctccaggatgcagttct
gtctctattaaatggcaacagtttgatgcaaatgcaccagagccattgcaggctcctgct
caaatacagtctttatttaacaacgaaagacttcttgtctatggatttatcccacattgt
actcaggccaccttaaatgcactaataaatgaccaagaattgcaagcaatggtatcaacc
actgaattacagaagacaacaggaacacttctccacaaactcacagcaagagccatcatt
agggattatgaagatgggatacttcatgaaaatgaaacagaacatgagatgaagaaacat
actttgaaagtcctgattattaacctcagcatggagaactccatcataacccagtttaca
agctttgtggcagtagaaaaaagggatgttaatgaagttaagcatgctggtcttccaaac
attcttgaacttatagctgaggaagatatagactttttaccctacatggactgggaacat
gagacatctggacatggatacctgtcttctaatagaggagtgggatttggcagatgtgaa
tcgatcatgtccacggtgtggcctccctccgatccacagggggaggaaccactttatgtg
cctgggtgggtggagtcaggccgggttcacccttctcactggaaattgagagagaggacg
ggaagtacaaaaagaggaaccttcagctcagttggagctgaggcagggcaggagacaggc
gaatattgctccctggtggcctcttactctgctgctgaaccaagcggtgccctgacccca
gaggagaccaagtccaaggaggagctgctgatggctgtgtacccccgggagatggacgac
acctacagagcccaggttgtatttccccaggcaaccactgctgctttcctgtctggccag
ctggtggggacagggggtatccctgacaatgcccagagatcagaaggcatggccctacca
acagcagcctttggcaggcccaagagagacactgcagtgctggctctgtctgactggcaa
ggagctgagaccaggatccgctgtttggaaaatgagcaggatgttaatgaagttcagcat
gctggtcttccaaacattccaatggctccagaacatttagacgttttaccctacaagaac
tgggagcatgatacatctggatacctgtcttctaatagaggagtgggattcggcagaagt
gaatcggttccttttcatgcagtaactagtggtttttctgaccatttcctaactggagga
gataaacagctgaaaagtctccaatttcgaagtgacgaagaagttcccttggttgaagag
tgcattttaccagattctactgaattgagttttataaaggctgctaaagttaaatatgat
cctggtgccgctagagttggactatttgggtctatctctgtgccacaaccaaaattcagc
ctgcatgatcaatcacttttaaacatcaggcttcccaagcctccagctagtaagcctttt
tcttttcaagtttctatacctcctccttgccctcttccttatgctgcttcttgccctcct
cgccctcctccttgcgctcctccttgccctcctcctttccctcatgaattcactcggggg
ctttggtcagatttaaagagttcatttactcctgtgggcagaaccctgaagaaggcaaat
tttgaaacacaagttactcctgaagttcttgcttcatcagctaggttcagactaggatca
ccaatgctacaaactgcaccaaagtgtggagaaaaacttcatcgtgagctcagcaaggat
cttttcttaacagcaatgaggaaaaaacagcttggtaaaacatcaccacagatgaggatt
caacaaagcccaccaagtgctgtaagctggactcagatttttgagctccaaaatcaggat
ggtttttggaatctcagcccagaacttggggttatcttggatcttgatgtggattattta
accaatattttccttgcaaaaaaaggcatttggtccctaggtcctaaaggaagagaagta
ttgcagttgattgctacacttttggtgctgcagttcatacgttataaacagcaattggaa
gggataaccttcaaatctctaatgaaactggatgattcgcccacttcaagtgctattcac
tgggcttttgcttcagtaaagaaagcagtggaatgggtaagaagagttgacagacaattt
ccagccatctgccatcgacttgaacttgggaaggattgggactctgccactaagaagttg
ttgggtatcgagttaatcagcaccaactttcctccaagtatttaa

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