KEGG   Chelonia mydas (green sea turtle): 102945607
Entry
102945607         CDS       T02989                                 
Symbol
NUP88
Name
(RefSeq) nuclear pore complex protein Nup88
  KO
K14318  nuclear pore complex protein Nup88
Organism
cmy  Chelonia mydas (green sea turtle)
Pathway
cmy03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102945607 (NUP88)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmy03019]
    102945607 (NUP88)
Messenger RNA biogenesis [BR:cmy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102945607 (NUP88)
SSDB
Motif
Pfam: Nup88 FtsA_C Syntaxin-6_N
Other DBs
NCBI-GeneID: 102945607
NCBI-ProteinID: XP_037736710
Position
17:17721867..17737641
AA seq 766 aa
MHAGTCSPALRPRPVHAGSGSSEEPAGPCRRLAGGGRRCSGVAAMAAEGEPADEWRAALP
HHAVLCRLREQSAERPSPPGPTRSLIFGLDADLFLWDAELGAFCTLSLRGLSGAEPEGLG
RYQTLVCINPPLFEVYETLLSPTQHHVALIGIKGLMVLELPKRWGKNSEFEGGKPTINCS
TIPVAERFFTSLTSLTLKHVAWYPSETLEPHVVLLTSDNTIRIYSLKVPQTPVKVIALSD
AEEESLMLNKGRAYTASLGETAVAFDFGPLVSVPKNIAGQRGREEVLAYPLYILYENGET
FLTYISLLQSTGKLGKLLGPLPMHPTAEDNYGYDACAVLCLPCVPNILVIATESGMLYHC
VVLEGEEDDEQTSEKSWDPRSDLIPSLYVFECVELELALKLASGEEEEPLESDFSCPIKL
YRDPKCPSRYHCIHEAGVHSVGLTWLHKLHKFLGSDEEDKDSLQELGAEQKCFVEHILCT
KPLPCRQPAPIRGFWIVSDILGPTMICITSTYECITRPLLTTVHPASPPLLCTREDTEIT
VSPLRILAKSQHSFEKHIRSILQRSSANPLLLKCADKDASPPPEECLQLLSRATQVFREE
YILKQDLAKEEIQQRVKLLRAQKNKQLEDLQYCQEERNSLREMAERLAEKYEEAKEKQDD
IMNRMKKVLRSFHSQLPVLSDSERDMKKELQAIHDQLQHLGNAIKQVKMKKDYQQRKMEK
GINPRKPTITLSAYQSKCIQTVLKEEGEHIREMVKQINDIRSHVNF
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgcacgctgggacttgtagtcccgctctgcgcccccgcccggtgcacgctgggagcggt
agttctgaggagccagccggcccttgccggcgattggctggcggagggcggcgctgttcc
ggggtggcggcgatggcggccgagggggagccggcggacgagtggcgggcggcgctgccg
caccatgccgtgctgtgccggctgcgggagcagagcgcggagagacccagcccgcccggc
ccgacccgcagcctgatcttcgggctggacgcggacctgttcctgtgggacgcggagctc
ggcgccttctgcaccctcagcctgcggggcctgagcggcgcggagcccgaggggctgggc
cggtaccagaccctggtctgcataaatccacccctttttgaggtctatgaaaccctgtta
agtcccacccagcatcatgtggcgctcataggcattaaagggctgatggtactggaattg
cctaagcgctggggaaagaactcagaatttgaaggtggaaaaccaacaattaattgtagc
accattcctgttgctgaaaggttcttcactagtttgacatccctgaccctaaaacatgtg
gcctggtatcccagtgagacattagaacctcatgtagtgctgttgacttcagataacact
ataaggatttacagtctgaaggtgccacagacacctgtgaaggtgattgctctttcagat
gctgaggaggagagtttaatgctcaataaagggagagcgtacacagcatcactaggagag
actgcagtggcatttgattttgggcctctggtatctgttccgaagaacatagctgggcag
cgagggagagaggaagtattggcatatccactatacatattgtatgaaaatggggagacc
tttctcacatatattagcctcttacaaagcactggaaaacttggcaagctgttgggccca
ttgcccatgcaccccacagctgaagataactatggctatgatgcttgtgctgttctgtgc
ctgccctgtgttcccaacatcttggtgattgccaccgagtcaggaatgctttatcactgt
gtggtactggagggagaagaggatgatgagcaaacgtcagaaaagtcttgggacccaaga
tctgacctcatcccttctctgtatgtgtttgaatgtgttgaattggaacttgcactgaaa
ctggcatcaggagaagaggaagagcctttagaatctgacttctcttgcccaattaaattg
tacagagatcctaaatgtccctctagatatcactgtatacacgaagctggtgtgcacagt
gttggactaacgtggctccacaaacttcacaaattccttgggtcagatgaggaagacaag
gacagtttacaagaacttggagcagaacagaagtgctttgtggaacatattctttgtaca
aagccattgccatgcaggcaacctgctccaattagaggattttggatagtctctgacatt
ttagggcccacgatgatctgcatcaccagcacctatgaatgtatcacgaggcctcttctg
acgacagtccatccagcatcccctccgctcctgtgtaccagagaggacactgaaattacg
gtctcacctctccgtatcctagctaaatcacagcattcatttgagaagcatatccgaagc
atcctgcagcgcagctctgctaacccattgcttttgaagtgtgctgacaaagatgcatct
cctcccccagaggaatgtcttcagctcctaagcagagccacacaagtgttcagagaagaa
tatattctgaaacaggatctggcaaaagaggagatccagcaaagagtgaaattgctgagg
gcacagaaaaataaacaactggaagatcttcagtactgtcaagaggaaaggaacagtctg
cgggaaatggccgagcgcttggctgagaagtatgaggaagctaaagaaaaacaagacgat
attatgaataggatgaagaaagtgcttcgcagttttcactctcagcttccagttctgtcc
gatagcgagagagacatgaagaaagaattacaggcaatacacgatcaactgcagcactta
ggaaatgctatcaaacaggtgaaaatgaaaaaggattatcagcagagaaagatggaaaag
gggatcaatccacgaaaacctaccataactctcagtgcctaccagagcaagtgcatccag
acagttctgaaagaagagggagaacacataagggaaatggtaaaacagatcaatgacatc
agaagccatgtgaacttctaa

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